Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 527 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  154 bits (388), Expect = 1e-41
 Identities = 131/550 (23%), Positives = 255/550 (46%), Gaps = 58/550 (10%)

Query: 3   LLEVKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQI 62
           L+E++++  ++   EV+  VS ++  G+ + ++G SG+GKSV  H +  +   +  S Q 
Sbjct: 5   LIEIRDLRVAFNGHEVVHGVSLDIRRGECLALVGESGSGKSVTAHSILRLLPAKTVSTQG 64

Query: 63  IYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFA- 121
             H                         Y    +   ++ ++      ++A++ Q   + 
Sbjct: 65  SIH-------------------------YDGLDLVTASDKQLRSLRGNRVAMIFQEPMSS 99

Query: 122 LYGEKTVAENIMEAL-TAAGYEGKDATEWALNLIKMVKLEHRVAHIS---RDLSGGEKQR 177
           L    TV + I+E L T  G +GK A    L L+++V +   ++ +      LSGG++QR
Sbjct: 100 LNPLHTVEKQIVEILVTHKGLKGKAALSRTLELLELVGIRDPLSRLKAYPHQLSGGQRQR 159

Query: 178 VVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELC 237
           +++A  +A  P + +ADEPT  LD      +   L     + N+++++ SH   ++  + 
Sbjct: 160 IMIAMALANEPDLLIADEPTTALDVTVQVKILELLKSLQQRLNMSLLLISHDLNLVRRIA 219

Query: 238 QKAIWLDKGEM-------RLVGESKHVVEEFMKTVTSMKEFEKVEVKDELLKLENVE--- 287
           Q+   + +GE+        L    +H     +       E       + LL +++++   
Sbjct: 220 QRVCVMREGEIVEQADCQTLFDSPQHPYSRLLINAEPDGEPVPSTHSNTLLSVQDLKVWF 279

Query: 288 ---KRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYEF 344
              K +   +   VKAVDG+   + + +  G+VG SG+GK+TL + I  ++  S+G+  F
Sbjct: 280 PLGKAWFKREPQYVKAVDGVSFELLKGKTLGIVGESGSGKSTLGQAILRLVD-SEGSIRF 338

Query: 345 RLADEWVDMTKV-GPLYRGRAKRYIGMLFQEY--SLYPHRTILYNLTESIGLEMPGEFAK 401
              +  +    +  PL     +R + ++FQ+   SL P  T+   + E +     G    
Sbjct: 339 GTKELSLHSQHLMRPL-----RRQLQVVFQDPFGSLSPRMTVEQIIAEGLVTHNIG--TP 391

Query: 402 MKAEHTLVSVGFTEEEAENMLEKH--PSELSVGEKHRVALAQVLIREPHLILLDEPTGTM 459
            + E T++ V   +E   +   +H  P E S G++ RV++A+ L+ EP LILLDEPT  +
Sbjct: 392 KEREQTVIRV--LQEVGLDPATRHRYPHEFSGGQRQRVSIARALVLEPDLILLDEPTSAL 449

Query: 460 DPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEIVKI 519
           D   + Q+   ++  +     TY+ +SHD+  V  +     +++ GK+++ G   EI   
Sbjct: 450 DRTVQKQIVALLRDLQIRHGLTYLFISHDLAVVHALAHDLIVIKDGKVVEQGPSREIFAA 509

Query: 520 LSEEEKDEMI 529
             +    E++
Sbjct: 510 PQQAYTQELL 519