Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 368 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  122 bits (305), Expect = 3e-32
 Identities = 80/240 (33%), Positives = 132/240 (55%), Gaps = 16/240 (6%)

Query: 277 KDELLKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIP 336
           + E+L L+ V K++       + AVD +   +   EI GLVG SG GKTTL ++IA    
Sbjct: 3   QSEVLCLDRVCKQFSGSS---LAAVDQVSFELEAGEILGLVGPSGCGKTTLLRMIAGFES 59

Query: 337 PSKGNYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLTESIGLEMP 396
              G+ +  LA E V   +       R+   +GM+FQ+Y+L+PH T+L N+   +  +  
Sbjct: 60  LQSGSIQ--LAGETVATAQRSLPPETRS---VGMVFQDYALFPHLTVLDNVCFGLR-DRK 113

Query: 397 GEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPT 456
           G  A  +    LV +       E +  ++P ELS G++ RVALA+ L  +P LILLDEP 
Sbjct: 114 GSAAVARQALALVGL-------EGLERRYPHELSGGQQQRVALARALAPQPPLILLDEPL 166

Query: 457 GTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEI 516
             +D   R ++ + ++    +   T ++V+HD +  L++CDR A++R G+  + G+P+E+
Sbjct: 167 SNLDVQVRLRLRQELRDILRQAQATAILVTHDQEEALSICDRVAVMRLGRFEQIGQPEEL 226



 Score = 81.6 bits (200), Expect = 4e-20
 Identities = 68/262 (25%), Positives = 105/262 (40%), Gaps = 40/262 (15%)

Query: 22  VSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQIIYHVAYCPHCENVEAPSQV 81
           VSFEL  G+++G++G SG GK+ LL M+ G E  +  S Q+             E  +  
Sbjct: 27  VSFELEAGEILGLVGPSGCGKTTLLRMIAGFESLQSGSIQLAG-----------ETVATA 75

Query: 82  GKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFALYGEKTVAENIMEALTAAGY 141
            +    ET  V             YAL   + ++    F L   K  A    +AL   G 
Sbjct: 76  QRSLPPETRSVGMVFQ-------DYALFPHLTVLDNVCFGLRDRKGSAAVARQALALVGL 128

Query: 142 EGKDATEWALNLIKMVKLEHRVAHISRDLSGGEKQRVVLARQIAKNPVIFLADEPTGTLD 201
           EG               LE R  H   +LSGG++QRV LAR +A  P + L DEP   LD
Sbjct: 129 EG---------------LERRYPH---ELSGGQQQRVALARALAPQPPLILLDEPLSNLD 170

Query: 202 PKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWLDKGEMRLVGES----KHV 257
            +    +   L + + +     ++ +H  E    +C +   +  G    +G+     +H 
Sbjct: 171 VQVRLRLRQELRDILRQAQATAILVTHDQEEALSICDRVAVMRLGRFEQIGQPEELFQHP 230

Query: 258 VEEFMKTVTSMKEFEKVEVKDE 279
              F+    S   F   E + +
Sbjct: 231 ASRFVAEFLSQANFLATEYQGD 252