Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 536 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  165 bits (418), Expect = 3e-45
 Identities = 139/546 (25%), Positives = 258/546 (47%), Gaps = 61/546 (11%)

Query: 1   MLLLEVKNVSKSYGDTE--VLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPT 58
           M LL +  +S +Y  +E   L+ +S EL  G+ +G++G SG GKS L             
Sbjct: 1   MTLLSIDQLSVTYPGSEQPALQQLSLELAAGERLGLVGESGCGKSTL------------- 47

Query: 59  SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR 118
            G+ I  +               G   + +     +++       +      ++ ++ Q 
Sbjct: 48  -GRAILRLL------------PPGSHQQGDIRLAGQALGQLQGRSLQRFRGGQVGLVFQD 94

Query: 119 TFA-LYGEKTVAENIMEALTA--AGYEGKDATEWALNLIKMVKLE-HRVAHISRDLSGGE 174
               L   +T+ ++++E L         + A + AL+ ++ V++  +R +      SGG 
Sbjct: 95  PMTRLDPLQTIGDHLLETLQVHRPHLSRRQAKQQALSWLERVRIPANRWSQYPHQFSGGM 154

Query: 175 KQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIE 234
           +QRV +A  +   P + +ADEPT +LD   A  +   LT    + N ++++ SH   ++ 
Sbjct: 155 RQRVAIALALLLQPRLVVADEPTTSLDVTVAAEILQELTRLCSEENTSLLLISHDLPMVA 214

Query: 235 ELCQKAIWLDKGEMRLVGESKHVVEEFMKTVT-SMKEFEKVEVKDE---------LLKLE 284
             C +   L +G++   G +  V+       T ++ +  +  +            LL+LE
Sbjct: 215 AYCDRIAVLYQGQLVETGPTTAVLTRPQHPYTQTLLQSARAAIASSPSTLPATTPLLQLE 274

Query: 285 NVEKRYVSVD------RG---IVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVI 335
           NV + +          RG   IV+AVDG+ + +   E  GL+G SG GK+TL + I  ++
Sbjct: 275 NVTQHFRVAQSWLQGWRGGGEIVRAVDGLSLEVWPGETLGLIGESGCGKSTLLRTILQLL 334

Query: 336 PPSKGNYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYS--LYPHRTILYNLTESIGL 393
            PS+G   F    +  D+T++        +R + ++FQ+ +  L P  TI   + + + +
Sbjct: 335 RPSQGKVLF----QGQDLTQLPDRRLRSLRRELQLIFQDPAACLNPRLTIGDAIADPLKI 390

Query: 394 E--MPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLIL 451
           +    G  AK +    L  VG T   A   ++++P +LS G++ RVA+A+ LI  P L+L
Sbjct: 391 QGLARGAAAKQQVLAILEQVGLTP--APTWIDRYPHQLSGGQQQRVAIARALITRPKLVL 448

Query: 452 LDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTG 511
            DEP   +D   + QV   +Q+ + +L+ TY+ V+HD+      CDR A+++ GKI++ G
Sbjct: 449 CDEPVSMLDATVQAQVLALMQELKQQLNLTYLFVTHDLRVAREFCDRVAVLQRGKIVEIG 508

Query: 512 KPDEIV 517
              +++
Sbjct: 509 PAAQVL 514



 Score = 68.2 bits (165), Expect = 8e-16
 Identities = 63/277 (22%), Positives = 122/277 (44%), Gaps = 49/277 (17%)

Query: 3   LLEVKNVSKSY-----------GDTEVLKNV---SFELNEGDVMGVLGRSGAGKSVLLHM 48
           LL+++NV++ +           G  E+++ V   S E+  G+ +G++G SG GKS LL  
Sbjct: 270 LLQLENVTQHFRVAQSWLQGWRGGGEIVRAVDGLSLEVWPGETLGLIGESGCGKSTLLRT 329

Query: 49  LRGMEGYEPTSGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYAL 108
           +  ++   P+ G++++        +  + P +  +                       +L
Sbjct: 330 I--LQLLRPSQGKVLFQGQ-----DLTQLPDRRLR-----------------------SL 359

Query: 109 KKKIAIMLQRTFALYGEK-TVAENIMEALTAAGY-EGKDATEWALNLIKMVKLEHRVAHI 166
           ++++ ++ Q   A    + T+ + I + L   G   G  A +  L +++ V L      I
Sbjct: 360 RRELQLIFQDPAACLNPRLTIGDAIADPLKIQGLARGAAAKQQVLAILEQVGLTPAPTWI 419

Query: 167 SR---DLSGGEKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAM 223
            R    LSGG++QRV +AR +   P + L DEP   LD      V   + E   + N+  
Sbjct: 420 DRYPHQLSGGQQQRVAIARALITRPKLVLCDEPVSMLDATVQAQVLALMQELKQQLNLTY 479

Query: 224 VITSHWPEVIEELCQKAIWLDKGEMRLVGESKHVVEE 260
           +  +H   V  E C +   L +G++  +G +  V+ +
Sbjct: 480 LFVTHDLRVAREFCDRVAVLQRGKIVEIGPAAQVLTQ 516