Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 593 a.a., peptide transport ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  129 bits (325), Expect = 2e-34
 Identities = 129/560 (23%), Positives = 241/560 (43%), Gaps = 80/560 (14%)

Query: 3   LLEVKN----VSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPT 58
           LL VK+    V+   G   V++ +SF+L  G  + + G SG+GKS+    L  +      
Sbjct: 5   LLSVKDLTVQVATPTGPKVVVERLSFDLLPGRTLCLAGESGSGKSMTALSLMQL------ 58

Query: 59  SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR 118
                              P  + +          + +       +     +KI ++ Q 
Sbjct: 59  ------------------LPKPMARIAGGSATLDGEDILALPEARMRRIRGRKIGMIFQE 100

Query: 119 TF-ALYGEKTVAENIMEALTAAGYEG--KDATEWALNLIKMVKL---EHRVAHISRDLSG 172
              +L    TV   ++ A+TA G     + A   A  L+  V++   E R+     +LSG
Sbjct: 101 PMTSLNPVMTVGNQLIGAITAHGNTSGRRAARARAAELLDQVQIPEPERRLGQYPHELSG 160

Query: 173 GEKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEV 232
           G +QR+V+A  +A+NP I +ADEPT  LD      +   + +    H I++++ +H   V
Sbjct: 161 GLRQRIVIAMALAQNPKILIADEPTTALDVTVQAQILALIRKLQADHGISVIMITHDMGV 220

Query: 233 IEELCQKAIWLDKGEMRLVGESKHV--------VEEFMKTVTSMKEFEKVE--------- 275
           + E+  + + +  G       S+ +         +E +  V  + E    E         
Sbjct: 221 VAEMADEVLVMKHGRTVEHATSRDLFAHPQDAYTKELLSAVPRLGEMAGTETPKRAAGKA 280

Query: 276 --------VKDELLKLENVEKRYVSVDRGIVK-------AVDGIDVSINEKEIFGLVGVS 320
                    +  +L++EN+  R+  +  GI++       AV+GI +S+   E   LVG S
Sbjct: 281 VEAGSEPGAEQPMLQVENLTVRF-DIKGGILQRPVRRLHAVEGISLSVRRGETLSLVGES 339

Query: 321 GAGKTTLSKIIAAVIPPSKGNYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQE--YSLY 378
           G GK+T  K +  ++P +        +   +  + + P+ R      + M+FQ+   SL 
Sbjct: 340 GCGKSTTGKALLNLVPWTGDIRVDGRSTRGLRGSTMRPILRD-----VQMIFQDPYASLD 394

Query: 379 PHRTILYNLTESIGLE--MPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHR 436
           P   +   + E + +     G   + + E+    VG + E+    ++++P E S G++ R
Sbjct: 395 PRMRVGDLVAEPLVIHGLASGSELRDRVEYLFKRVGLSPEQ----MKRYPHEFSGGQRQR 450

Query: 437 VALAQVLIREPHLILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVC 496
           + +A+ L   P LI+ DE    +D   + QV + +Q  + E   +Y+ +SHDM  V  + 
Sbjct: 451 ICIARALSLSPKLIVADESVAALDVSIQAQVLDLLQDIQDETGVSYLFISHDMAVVEQIS 510

Query: 497 DRAALVRGGKIIKTGKPDEI 516
            R A++  G+ ++ G   +I
Sbjct: 511 HRVAVMYMGRFVEMGTRRQI 530



 Score = 49.7 bits (117), Expect = 3e-10
 Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 4/133 (3%)

Query: 128 VAENIMEALTAAGYEGKDATEWALNLIKMVKLE-HRVAHISRDLSGGEKQRVVLARQIAK 186
           VAE ++    A+G E +D  E+   L K V L   ++     + SGG++QR+ +AR ++ 
Sbjct: 403 VAEPLVIHGLASGSELRDRVEY---LFKRVGLSPEQMKRYPHEFSGGQRQRICIARALSL 459

Query: 187 NPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWLDKG 246
           +P + +ADE    LD      V + L +   +  ++ +  SH   V+E++  +   +  G
Sbjct: 460 SPKLIVADESVAALDVSIQAQVLDLLQDIQDETGVSYLFISHDMAVVEQISHRVAVMYMG 519

Query: 247 EMRLVGESKHVVE 259
               +G  + + E
Sbjct: 520 RFVEMGTRRQIFE 532