Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 543 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  170 bits (430), Expect = 1e-46
 Identities = 144/544 (26%), Positives = 263/544 (48%), Gaps = 70/544 (12%)

Query: 3   LLEVKNV---SKSYGDTE------VLKNVSFELNEGDVMGVLGRSGAGKSV--LLHMLRG 51
           LL VKN+   + SY   E      ++++VSF+L +G V+G++G SGAGKS   L  +  G
Sbjct: 4   LLSVKNLKIEATSYPPGEPPKVVTLVEDVSFDLQKGKVLGLIGESGAGKSTIGLSALAYG 63

Query: 52  MEGYEPTSGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKK 111
             G   T G+++          N     ++G+            ++      + Y  +  
Sbjct: 64  RGGCRITGGEVLL---------NGRDILKLGRG----------GINSVRGRHVCYVAQSA 104

Query: 112 IAIMLQRTFALYGEKTVAENIMEALTAAGYEGKD-ATEWALNLIKMVKLEHRVAHISR-- 168
            A       A      + + ++EA    G   +D AT+ AL L +++ L +      R  
Sbjct: 105 AA-------AFNPAHKLGDQVIEASLRHGIMNRDEATKRALYLFRVLGLPNPETFGDRYP 157

Query: 169 -DLSGGEKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITS 227
             +SGG+ QR + A  +  NP + + DEPT  LD  T   V  A+  A+ + + A +  +
Sbjct: 158 HQVSGGQLQRAMTAMALCPNPELIVFDEPTTALDVTTQIDVLAAIKHAIEETDTAALYIT 217

Query: 228 HWPEVIEELCQKAIWLDKGEMRLVGESKHVVE----EFMKTVTSMKEFEKVEVKDE---L 280
           H   V+ ++    + L  G+    G +K V+E    E+ + + S+++ ++ E  D+   L
Sbjct: 218 HDLAVVAQISDDIMVLRHGKTVEYGTTKQVIEAPREEYTRALVSVRQAKRDEAPDQTDTL 277

Query: 281 LKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKG 340
           LK+E+V   Y +      K +  + + + + +   +VG SG+GK+TL+++I  ++PPS+G
Sbjct: 278 LKIEHVHAGYANG----FKVLHDVSMHLPKGQTLAIVGESGSGKSTLARVITGLLPPSEG 333

Query: 341 NYEFRLADEWVDMTKVGPLYRGRAK---RYIGMLFQ--EYSLYPHRTILYNLTESIGLEM 395
              F    E  ++ K     +GR     R I M++Q  + ++ P +T+     E +G  +
Sbjct: 334 RITF----EGKELPKA---LKGRTNDELRRIQMIYQMADTAMNPRQTV----REIVGRPL 382

Query: 396 PGEFAKMKAEHTLVSVGFTE--EEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLD 453
              F    A+ T       +  E     L+++P+ELS G+K RVA+A+ L  +P LIL D
Sbjct: 383 SFYFGMHGAKKTERVKELLDQIEMGTRFLDRYPAELSGGQKQRVAIARALAAKPELILCD 442

Query: 454 EPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKP 513
           EPT  +DP+    +   + K + E   +YV ++HD+  V  + D  A++  G++++ G  
Sbjct: 443 EPTSALDPLVAEGILNLLLKLQEETAVSYVFITHDIAIVRAIADSVAVMHRGRLVRFGPK 502

Query: 514 DEIV 517
            +++
Sbjct: 503 SKVL 506



 Score = 82.8 bits (203), Expect = 3e-20
 Identities = 74/293 (25%), Positives = 136/293 (46%), Gaps = 38/293 (12%)

Query: 3   LLEVKNVSKSYGDT-EVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQ 61
           LL++++V   Y +  +VL +VS  L +G  + ++G SG+GKS L  ++ G+    P+ G+
Sbjct: 277 LLKIEHVHAGYANGFKVLHDVSMHLPKGQTLAIVGESGSGKSTLARVITGL--LPPSEGR 334

Query: 62  IIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRT-F 120
           I +        E  E P               K++    N+E+     ++I ++ Q    
Sbjct: 335 ITF--------EGKELP---------------KALKGRTNDEL-----RRIQMIYQMADT 366

Query: 121 ALYGEKTVAENIMEALT-AAGYEGKDATEWALNLIKMVKLEHR-VAHISRDLSGGEKQRV 178
           A+   +TV E +   L+   G  G   TE    L+  +++  R +     +LSGG+KQRV
Sbjct: 367 AMNPRQTVREIVGRPLSFYFGMHGAKKTERVKELLDQIEMGTRFLDRYPAELSGGQKQRV 426

Query: 179 VLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQ 238
            +AR +A  P + L DEPT  LDP  A+ + N L +   +  ++ V  +H   ++  +  
Sbjct: 427 AIARALAAKPELILCDEPTSALDPLVAEGILNLLLKLQEETAVSYVFITHDIAIVRAIAD 486

Query: 239 KAIWLDKGEMRLVGESKHVVEEFMKTVTS--MKEFEKVEV--KDELLKLENVE 287
               + +G +   G    V+       T   +K   ++E+   +++LK   +E
Sbjct: 487 SVAVMHRGRLVRFGPKSKVLSPPFDDYTDLLLKSVPEMEIGWLEKVLKTRRME 539



 Score = 72.8 bits (177), Expect = 3e-17
 Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 23/260 (8%)

Query: 279 ELLKLENVEKRYVSVDRG----IVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAV 334
           ELL ++N++    S   G    +V  V+ +   + + ++ GL+G SGAGK+T+     + 
Sbjct: 3   ELLSVKNLKIEATSYPPGEPPKVVTLVEDVSFDLQKGKVLGLIGESGAGKSTIG---LSA 59

Query: 335 IPPSKGNYEFRLADEWV---DMTKVGP----LYRGRAKRYIGM----LFQEYSLYPHRTI 383
           +   +G       +  +   D+ K+G       RGR   Y+       F        + I
Sbjct: 60  LAYGRGGCRITGGEVLLNGRDILKLGRGGINSVRGRHVCYVAQSAAAAFNPAHKLGDQVI 119

Query: 384 LYNLTESIGLEMPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVL 443
             +L   I   M  + A  +A +    +G    E     +++P ++S G+  R   A  L
Sbjct: 120 EASLRHGI---MNRDEATKRALYLFRVLGLPNPETFG--DRYPHQVSGGQLQRAMTAMAL 174

Query: 444 IREPHLILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVR 503
              P LI+ DEPT  +D  T+  V  +I+ +  E D   + ++HD+  V  + D   ++R
Sbjct: 175 CPNPELIVFDEPTTALDVTTQIDVLAAIKHAIEETDTAALYITHDLAVVAQISDDIMVLR 234

Query: 504 GGKIIKTGKPDEIVKILSEE 523
            GK ++ G   ++++   EE
Sbjct: 235 HGKTVEYGTTKQVIEAPREE 254