Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 551 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  150 bits (380), Expect = 9e-41
 Identities = 139/540 (25%), Positives = 243/540 (45%), Gaps = 64/540 (11%)

Query: 4   LEVKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGME--GYEPTSGQ 61
           L+V+  + +    E++K VS ++ EG+++ ++G SG+GK+ +   L G    G   + G 
Sbjct: 10  LKVEATTDTGRRVEIIKGVSLDVAEGEIVALIGESGSGKTTIALTLMGYARPGCRISGGS 69

Query: 62  IIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFA 121
           ++                  G      TE     V      E+TY  +   A       A
Sbjct: 70  VLV----------------AGNDLVTLTEKQRAKV---RGTEVTYVPQSAAA-------A 103

Query: 122 LYGEKTVAENIMEALTAAGY-EGKDATEWALNLIKMVKLEHRVAHISR---DLSGGEKQR 177
                T+ + ++E     G     +A   A+ L + + L       SR    +SGG+ QR
Sbjct: 104 FNPAATIMDQVIEVTRIHGLMAAAEARARAVELFRALSLPEPETIGSRYPHQVSGGQLQR 163

Query: 178 VVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELC 237
           +  A  +  +P + + DEPT  LD  T   V  A    + K  IA V  SH   V+ ++ 
Sbjct: 164 LSAAMALISDPKLVIFDEPTTALDVTTQIEVLRAFKSVMKKGGIAGVYVSHDLAVVAQIA 223

Query: 238 QKAIWLDKGEMRLVGESKHVVEE----FMKTVTSMKEFEKVEVKDE-------LLKLENV 286
              + L  GE++ VG ++ ++      + + + S  E +  E  D        LLK+EN+
Sbjct: 224 DHIVVLKGGEVQEVGTTEEILSSAKHPYTRELLSAFEPKPREAADAAERAPAPLLKIENL 283

Query: 287 EKRY-VSVDRGI--VKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYE 343
              Y  S   G+  V+AV+ + + + +    G++G SG GK+TL++ IA ++P + G   
Sbjct: 284 VAGYGASKTDGLPLVRAVEDVSLKVEKGRNLGIIGESGCGKSTLARAIAGILPAAVGKIV 343

Query: 344 FRLADEWVDMTKVGPLYRGRAK---RYIGMLFQ--EYSLYPHRTILYNLTESIGLE--MP 396
           F       D  ++G   R R +   R + ++FQ  + +L P +++   L   +     M 
Sbjct: 344 F-------DGKELGRSARERTRDQLREMQIVFQYADTALNPAKSVEDILDRPLVFYHGMN 396

Query: 397 GEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPT 456
                ++ +  L  V        N+  + P ELS G+K RV  A+ L  +P LIL DE T
Sbjct: 397 ARARSLRIDELLDMVRLPR----NLRHRRPGELSGGQKQRVNFARALAADPKLILCDEIT 452

Query: 457 GTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEI 516
             +D +    V E +++ + EL  +Y+ +SHD+  V  +CD   ++ GGK ++   P +I
Sbjct: 453 SALDTVVAAAVIELLKELQRELGLSYIFISHDLSLVEAICDEIVVMYGGKKVEDITPAKI 512



 Score = 83.2 bits (204), Expect = 2e-20
 Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 14/249 (5%)

Query: 274 VEVKDELLKLENVEKRYVSVDRGI-VKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIA 332
           VE++D  LK+E       + D G  V+ + G+ + + E EI  L+G SG+GKTT++  + 
Sbjct: 5   VEIRD--LKVE------ATTDTGRRVEIIKGVSLDVAEGEIVALIGESGSGKTTIALTLM 56

Query: 333 AVIPPS---KGNYEFRLADEWVDMT-KVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLT 388
               P     G       ++ V +T K     RG    Y+       +  P  TI+  + 
Sbjct: 57  GYARPGCRISGGSVLVAGNDLVTLTEKQRAKVRGTEVTYVPQSAAA-AFNPAATIMDQVI 115

Query: 389 ESIGLEMPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPH 448
           E   +      A+ +A    +    +  E E +  ++P ++S G+  R++ A  LI +P 
Sbjct: 116 EVTRIHGLMAAAEARARAVELFRALSLPEPETIGSRYPHQVSGGQLQRLSAAMALISDPK 175

Query: 449 LILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKII 508
           L++ DEPT  +D  T+ +V  + +    +     V VSHD+  V  + D   +++GG++ 
Sbjct: 176 LVIFDEPTTALDVTTQIEVLRAFKSVMKKGGIAGVYVSHDLAVVAQIADHIVVLKGGEVQ 235

Query: 509 KTGKPDEIV 517
           + G  +EI+
Sbjct: 236 EVGTTEEIL 244