Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  139 bits (350), Expect = 3e-37
 Identities = 132/536 (24%), Positives = 239/536 (44%), Gaps = 67/536 (12%)

Query: 12  SYGD-TEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEP---TSGQIIYHVA 67
           S GD    + +VSF++  G+ + +LG SG+GKSV    + G+    P    SG +++   
Sbjct: 20  SEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCPPGDIVSGSLVFDGT 79

Query: 68  YCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFA-LYGEK 126
                ++       G++                           IA++ Q   A L    
Sbjct: 80  DLSRLDDEGRRELNGRR---------------------------IAMIFQDPLAYLNPVY 112

Query: 127 TVAENIMEALTAAGY-EGKDATEWALNLIKMVKL---EHRVAHISRDLSGGEKQRVVLAR 182
           TV   I E   + G  EG    +  + L++ V +   + R+ +     SGG++QRV++A 
Sbjct: 113 TVGRQIAEVFESHGEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAM 172

Query: 183 QIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIW 242
            IA  P I +ADEPT  LD      +   L +   +  +A+++ +H  EV   +  + I 
Sbjct: 173 AIALKPDILIADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIV 232

Query: 243 LDKGEMRLVGESKHV--------VEEFMKTVT---SMKEFEKVEVKDELLKLENVEKRY- 290
           ++ G++   G+++ V            M  V    + K        + LL++ ++ K Y 
Sbjct: 233 MNGGKVVESGKAEDVFTNPSHAYTRRLMSAVPHADAPKAPRNAAQGEVLLQVAHLSKHYK 292

Query: 291 -----VSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYEFR 345
                 S  R   +AVD +  ++   E  G+VG SG+GK+++++++  +  P+ G   F 
Sbjct: 293 LGSGPFSPKREF-RAVDDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEPTSGAALFA 351

Query: 346 LADEWVDMTKVGPLYRGRAKRYIGMLFQEY--SLYPHRTILYNLTESIGLE---MPGEFA 400
             D +    K    +R R +    M+FQ+   S+ P   +   ++E   +    +P E  
Sbjct: 352 GEDIFELKGKALDGFRRRVQ----MVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERW 407

Query: 401 KMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMD 460
             +    L  VG   E A     +HP + S G++ R+A+A+ L  EP LI+ DE    +D
Sbjct: 408 NERVVELLELVGLKAEHAA----RHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALD 463

Query: 461 PITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEI 516
              + QV E +   R  L  +YV ++HD+  V    DR  +++ G+I++ G+ + +
Sbjct: 464 VSIQMQVIELLADLRQRLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEAL 519



 Score = 69.3 bits (168), Expect = 3e-16
 Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 46/269 (17%)

Query: 2   LLLEVKNVSKSYG----------DTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRG 51
           +LL+V ++SK Y           +   + +VSF L  G+ +G++G SG+GKS +  ML  
Sbjct: 280 VLLQVAHLSKHYKLGSGPFSPKREFRAVDDVSFTLRRGETVGIVGESGSGKSSIARMLLR 339

Query: 52  MEGYEPTSGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKK 111
           +   EPTSG  ++                     E   E   K++D           +++
Sbjct: 340 LN--EPTSGAALF-------------------AGEDIFELKGKALD---------GFRRR 369

Query: 112 IAIMLQRTFALYGEKTVAENIMEALTAAGYEGKDATEWALNLIKMVKL-----EHRVAHI 166
           + ++ Q  F     +    +I+    A   +      W   ++++++L     EH   H 
Sbjct: 370 VQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLKAEHAARH- 428

Query: 167 SRDLSGGEKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVIT 226
               SGG++QR+ +AR +A  P + + DE    LD      V   L +   +  ++ V  
Sbjct: 429 PHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQRLGLSYVFI 488

Query: 227 SHWPEVIEELCQKAIWLDKGEMRLVGESK 255
           +H   ++ +   + + + +G +   GE++
Sbjct: 489 THDLPIVRQFADRILVMQRGRIVEEGETE 517