Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  168 bits (426), Expect = 4e-46
 Identities = 144/549 (26%), Positives = 260/549 (47%), Gaps = 71/549 (12%)

Query: 3   LLEVKNVSKSY----GDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPT 58
           +++ + V+ S+    G  + +K+VSF+L  G+ + ++G SG+GKSV    + G+     T
Sbjct: 25  VIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSKRAT 84

Query: 59  SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR 118
                             AP       +   EY  + V  ++  E       +I+++ Q 
Sbjct: 85  I-----------------AP-------QARIEYDGRDVLKFSKRERRALRGDRISMIFQE 120

Query: 119 TFA-LYGEKTVAENIMEALTA-AGYEGKDATEWALNLIKMVKL---EHRVAHISRDLSGG 173
             + L    T+   I+EA+ A      + A E AL L++ V++   E R+      LSGG
Sbjct: 121 PMSSLNPVYTIGSQIIEAIRAHRRVSRRAAAERALELLRHVQIPDPEARLNQYPHQLSGG 180

Query: 174 EKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVI 233
           ++QRV++A  +A +P + +ADEPT  LD      + N + +   +  +A+++ +H   V+
Sbjct: 181 QRQRVMIAMALANDPDVLIADEPTTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVV 240

Query: 234 EELCQKAIWLDKGEMR-------LVGESKHVVEEFMKTVTSMKEFEKVEVKDE---LLKL 283
            +       +  GE++       L  + +H      + ++S        + D+   LL  
Sbjct: 241 RQFSDYVYVMQLGEVKEHNTTEALFADPQHAYTR--RLLSSEPSGSANPLPDDAPILLDG 298

Query: 284 ENVEKRYVSVDRGIVK-------AVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIP 336
            NV   +     G  +       AVDG+ +++   E  GLVG SG+GKTT  + +  ++ 
Sbjct: 299 RNVRVSFTLKKGGFFRPEFKELVAVDGLSLNLRRHETLGLVGESGSGKTTFGQALIRLLN 358

Query: 337 PSKGNYEFR---LADEWVDMTKVGPLYRGRAKRYIGMLFQE--YSLYPHRTILYNLTESI 391
              G   F    + D+  D   + PL   R+K  I ++FQ+   SL P  ++   + E +
Sbjct: 359 TDGGEIYFEGEPIHDK--DRKGMRPL---RSK--IQIVFQDPFSSLNPRMSVGQIIEEGL 411

Query: 392 GLEMPGEFAK---MKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPH 448
            +   GE  K    + E  LVS G       N+L + P E S G++ R+A+A+ +  EP 
Sbjct: 412 IVNGMGENRKDRLKRVEDALVSAGMPS----NILSRFPHEFSGGQRQRIAIARAVALEPE 467

Query: 449 LILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKII 508
            ILLDEPT  +D   + Q+ E +++ + E   +Y+++SHD+  V  +C R  +++ GKI+
Sbjct: 468 FILLDEPTSALDLSVQAQIIELLRRLQDERGLSYLVISHDLKVVRALCHRVVVMQDGKIV 527

Query: 509 KTGKPDEIV 517
           + G   E++
Sbjct: 528 EEGPVSEVL 536