Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 263 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  134 bits (337), Expect = 4e-36
 Identities = 83/242 (34%), Positives = 135/242 (55%), Gaps = 21/242 (8%)

Query: 280 LLKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSK 339
           L+ ++NV K +     G ++ + GI +++N  E+  L+G SG+GK+TL + I  + P   
Sbjct: 10  LITMDNVSKSF-----GALQVLKGITLAVNRSEVVCLIGPSGSGKSTLLRCINFLEPYDA 64

Query: 340 GNYEFRLADEWVDMTKVGPLYRGR------AKRYIGMLFQEYSLYPHRTILYNLTESIGL 393
           G  E R+    V  T+  P  R         +R +GM+FQ ++L+PH T L N+ E++  
Sbjct: 65  G--EVRIEGRLVGYTESFPRRRQSNRELRDLRRNVGMVFQHFNLWPHMTALENVREALVQ 122

Query: 394 --EMPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLIL 451
             +M    A  +AE  L  VG ++      +  HP+ LS G++ RVA+A+V+  EPH++L
Sbjct: 123 VRKMSLAQATARAEEVLTRVGLSDR-----MHVHPARLSGGQQQRVAIARVVAMEPHVML 177

Query: 452 LDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTG 511
            DEPT  +DP    +V + ++   +E   T V+V+H+M F  NV DR A + GG+I+  G
Sbjct: 178 FDEPTSALDPELVGEVLQVMRDLATE-GMTMVVVTHEMGFAANVADRVAFLDGGRIVACG 236

Query: 512 KP 513
            P
Sbjct: 237 PP 238



 Score = 93.6 bits (231), Expect = 8e-24
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 25/259 (9%)

Query: 3   LLEVKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQI 62
           L+ + NVSKS+G  +VLK ++  +N  +V+ ++G SG+GKS LL  +  +E Y+  +G++
Sbjct: 10  LITMDNVSKSFGALQVLKGITLAVNRSEVVCLIGPSGSGKSTLLRCINFLEPYD--AGEV 67

Query: 63  IYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFAL 122
                   + E+     Q                   +N E+   L++ + ++ Q  F L
Sbjct: 68  RIEGRLVGYTESFPRRRQ-------------------SNRELR-DLRRNVGMVFQH-FNL 106

Query: 123 YGEKTVAENIMEALTAAGYEG-KDATEWALNLIKMVKLEHRVAHISRDLSGGEKQRVVLA 181
           +   T  EN+ EAL          AT  A  ++  V L  R+      LSGG++QRV +A
Sbjct: 107 WPHMTALENVREALVQVRKMSLAQATARAEEVLTRVGLSDRMHVHPARLSGGQQQRVAIA 166

Query: 182 RQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAI 241
           R +A  P + L DEPT  LDP+    V   + + +    + MV+ +H       +  +  
Sbjct: 167 RVVAMEPHVMLFDEPTSALDPELVGEVLQVMRD-LATEGMTMVVVTHEMGFAANVADRVA 225

Query: 242 WLDKGEMRLVGESKHVVEE 260
           +LD G +   G  + V  E
Sbjct: 226 FLDGGRIVACGPPRAVFHE 244