Pairwise Alignments
Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2
Subject, 541 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H
Score = 138 bits (348), Expect = 5e-37
Identities = 121/515 (23%), Positives = 229/515 (44%), Gaps = 55/515 (10%)
Query: 19 LKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGM--EGYEPTSGQIIYHVAYCPHCENVE 76
+ ++SF++ G V+ +LG SG+GKSV+ + G+ G P G I C
Sbjct: 30 VSDISFDVPPGKVVCLLGESGSGKSVIASAIMGLLPPGLRPVKGAIELRGQALLSCSQAA 89
Query: 77 APSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFALYGEKTVAENIMEAL 136
+ G + E AL + Q + E + + +
Sbjct: 90 LRALRGTTMAMVFQ------------EPMTALNPVMTCGAQ----------IDEMLAQHV 127
Query: 137 TAAGYEGKDATEWALNLIKMVKLEHRVAHISRDLSGGEKQRVVLARQIAKNPVIFLADEP 196
E + A + +++ + E A LSGG++QR+V+A + P + + DEP
Sbjct: 128 KRPKAERRAAILAIMERVRLPEPERIYASYPHQLSGGQRQRIVIAMALILKPALLICDEP 187
Query: 197 TGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWLDKGEMRLVGESKH 256
T LD T + + E ++ A++ +H V+ E+ + + L+ G M G+
Sbjct: 188 TTALDVTTQAEILKLILELQRENGTAVLFITHDFGVVAEIADEVVVLELGAMIEKGDKHA 247
Query: 257 VVEEFMKTVTSM----------KEFEKVEVKDELLKLENVEKRYVSVD----RGIVKAVD 302
V+ + T M + VE LL+ +++ K YVS R +V+A
Sbjct: 248 VLTAPRQPYTKMLLAAVPELSPPDRPAVENAYPLLQAKDLCKTYVSGGWPGKRRVVQAAK 307
Query: 303 GIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYEFRLADEWVDMTKVGPLYRG 362
G+ + + E G+VG SG+GK+T+++ IA +I P+ G D + D V +
Sbjct: 308 GVSLMVRPGETIGIVGESGSGKSTVARCIARLIDPTSG-------DIFADGRSVATATKR 360
Query: 363 RA---KRYIGMLFQE--YSLYPHRTILYNLTES-IGLEMPGEFAKMKAEHTLVSVGFTEE 416
+R++ ++FQ+ SL P +T+ ++ E + +P A KAE + V +
Sbjct: 361 ELSPFRRHVQVVFQDPYRSLNPRQTVGESIIEGPVNFGVPRAEAWAKAEELMHLVRLKPD 420
Query: 417 EAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPITRNQVAESIQKSRS 476
L ++P+E S G++ R+++A+ L P +++ DE +D + Q+ +++ +
Sbjct: 421 A----LRRYPNEFSGGQRQRISIARALACNPKVLIADEAVSALDVSVQAQILTLLEEIQG 476
Query: 477 ELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTG 511
L + V+HD+ +CD ++ G+I++ G
Sbjct: 477 RLRIGILFVTHDLRVASQICDHVLVMYKGEIVEEG 511
Score = 75.5 bits (184), Expect = 5e-18
Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 9/218 (4%)
Query: 300 AVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPS----KGNYEFRLADEWVDMTK 355
AV I + ++ L+G SG+GK+ ++ I ++PP KG E R + ++
Sbjct: 29 AVSDISFDVPPGKVVCLLGESGSGKSVIASAIMGLLPPGLRPVKGAIELR-GQALLSCSQ 87
Query: 356 VGPLYRGRAKRYIGMLFQE--YSLYPHRTILYNLTESIGLEMPGEFAKMKAEHTLVSVGF 413
R + M+FQE +L P T + E + + A+ +A +
Sbjct: 88 AA--LRALRGTTMAMVFQEPMTALNPVMTCGAQIDEMLAQHVKRPKAERRAAILAIMERV 145
Query: 414 TEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPITRNQVAESIQK 473
E E + +P +LS G++ R+ +A LI +P L++ DEPT +D T+ ++ + I +
Sbjct: 146 RLPEPERIYASYPHQLSGGQRQRIVIAMALILKPALLICDEPTTALDVTTQAEILKLILE 205
Query: 474 SRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTG 511
+ E + ++HD V + D ++ G +I+ G
Sbjct: 206 LQRENGTAVLFITHDFGVVAEIADEVVVLELGAMIEKG 243
Score = 74.3 bits (181), Expect = 1e-17
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 41/257 (15%)
Query: 3 LLEVKNVSKSYGD---------TEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGME 53
LL+ K++ K+Y + K VS + G+ +G++G SG+GKS + + +
Sbjct: 281 LLQAKDLCKTYVSGGWPGKRRVVQAAKGVSLMVRPGETIGIVGESGSGKSTVARCIARL- 339
Query: 54 GYEPTSGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIA 113
+PTSG I +SV E++ ++ +
Sbjct: 340 -IDPTSGDIFAD---------------------------GRSVATATKRELS-PFRRHVQ 370
Query: 114 IMLQRTF-ALYGEKTVAENIMEALTAAGYEGKDATEWALNLIKMVKLE-HRVAHISRDLS 171
++ Q + +L +TV E+I+E G +A A L+ +V+L+ + + S
Sbjct: 371 VVFQDPYRSLNPRQTVGESIIEGPVNFGVPRAEAWAKAEELMHLVRLKPDALRRYPNEFS 430
Query: 172 GGEKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPE 231
GG++QR+ +AR +A NP + +ADE LD + L E + I ++ +H
Sbjct: 431 GGQRQRISIARALACNPKVLIADEAVSALDVSVQAQILTLLEEIQGRLRIGILFVTHDLR 490
Query: 232 VIEELCQKAIWLDKGEM 248
V ++C + + KGE+
Sbjct: 491 VASQICDHVLVMYKGEI 507