Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 539 a.a., ABC transporter ATP-binding protein from Rahnella sp. WP5

 Score =  161 bits (407), Expect = 7e-44
 Identities = 138/549 (25%), Positives = 256/549 (46%), Gaps = 55/549 (10%)

Query: 3   LLEVKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQI 62
           +LE++NVS  Y    V+ NVSF +N G+V+ ++G SG+GK+              T+  I
Sbjct: 14  VLELENVSIGYDGKPVVHNVSFSINAGEVLALVGESGSGKTT-------------TAQAI 60

Query: 63  IYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR-TFA 121
           I  +A   H E            + E       +  W+   +      +I+++ Q  T +
Sbjct: 61  IGLLAENGHIE------------QGEIRLNGTDISQWSQRRLDALRGARISLIPQDPTSS 108

Query: 122 LYGEKTVAENIMEALTA---AGYEGKDATEWALNLIKMVKLEH---RVAHISRDLSGGEK 175
           L   KT+   + E L          +DA    + L+  V L H   R      +LSGG K
Sbjct: 109 LDPVKTIGSQVAEILDIHQRLPRVQRDAR--VVELLSRVGLSHPEQRAKQYPHELSGGMK 166

Query: 176 QRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEE 235
           QRV++A  IA  P + +ADEPT  LD    K + + + E   +   A+++ +H   +  E
Sbjct: 167 QRVLIAIAIALQPALIIADEPTSALDVTVQKRILDLIDELRRESGTAVLLVTHDLAIAAE 226

Query: 236 LCQKAIWLDKGEMRLVGESKHVVE--------EFMKTVTSMKEFEKVEVK---DELLKLE 284
              + +    G+++  G ++ V++        +      ++    + +++   D +L +E
Sbjct: 227 RADRLLVFRHGKVQEQGITREVLDAPKSDYTRQLFADAPALSGRHRAQLRAAEDPVLVVE 286

Query: 285 NVEKRYV--SVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNY 342
           N+   +      +   +AVD +  SI       LVG SG+GKTTL++I+     P  G+ 
Sbjct: 287 NITHDFTLGGKHQAAFRAVDHVSFSIPRGTTHSLVGESGSGKTTLARILLGFQKPDSGH- 345

Query: 343 EFRLADEWVDMTKVGPLYRGRAKRYIGMLFQE--YSLYPHRTILYNLTESIGLEMPGEFA 400
              +  +  D+T++      + ++ I +++Q    SL P +T L+ + E   L      A
Sbjct: 346 ---VLIDGEDITRLKGEALRQLRKKIQLVYQNPFASLDPSQT-LFRVIEEPLLNFEKIPA 401

Query: 401 KMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMD 460
            ++ E  L  +       E +L + P ELS G++ RVA+A+ LI EP +++LDE T  +D
Sbjct: 402 AVRRERVL-DIARRVALPEELLSRKPRELSGGQRQRVAIARALILEPKVLILDEATSALD 460

Query: 461 PITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEIVKIL 520
              + Q+   +Q+ +  L  TY+ +SHD+  V  +    +++  G+ + +G  +++  + 
Sbjct: 461 VTVQAQILTLLQQLQDSLGLTYLFISHDLATVRQISHSVSVLNRGQQVDSGNVEDVFALP 520

Query: 521 SEEEKDEMI 529
           S +   ++I
Sbjct: 521 SSDYTRQLI 529