Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 257 a.a., ABC transporter ATP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  124 bits (311), Expect = 4e-33
 Identities = 79/239 (33%), Positives = 127/239 (53%), Gaps = 15/239 (6%)

Query: 275 EVKDELLKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAV 334
           EV D ++++     R V+V  G  + ++G+D+ +   EI G VG SGAGK+ L++ I  +
Sbjct: 3   EVADPIIRV-----RDVTVQFGTTRVLNGLDLDVRRGEILGFVGPSGAGKSVLTRTIIGL 57

Query: 335 IPPSKGNYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLTESIG-- 392
           +P   GN E       +D+ K     R   +R  G+LFQ+ +L+   T+  N+   +   
Sbjct: 58  VPKLSGNIEVF----GIDLDKANKTDRRGIERRWGILFQQGALFSSLTVRQNIQFPVREY 113

Query: 393 LEMPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILL 452
           L++            LV VG   E    +++++PSELS G   RVALA+ L  +P L+ L
Sbjct: 114 LKLSQRLLDEITIAKLVMVGLKPE----VIDRYPSELSGGMIKRVALARALALDPELVFL 169

Query: 453 DEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTG 511
           DEPT  +DPI   +  E ++  +  L  T  +V+HD+D +   CDR A++  GK+I  G
Sbjct: 170 DEPTSGLDPIGAGEFDELVRTLQRTLGLTVFMVTHDLDSLHTACDRIAVLGDGKVIAAG 228



 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 61/252 (24%), Positives = 106/252 (42%), Gaps = 33/252 (13%)

Query: 3   LLEVKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQI 62
           ++ V++V+  +G T VL  +  ++  G+++G +G SGAGKSVL   + G+      SG I
Sbjct: 8   IIRVRDVTVQFGTTRVLNGLDLDVRRGEILGFVGPSGAGKSVLTRTIIGL--VPKLSGNI 65

Query: 63  IYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFAL 122
                                      E     +D  N  +    ++++  I+ Q+  AL
Sbjct: 66  ---------------------------EVFGIDLDKANKTD-RRGIERRWGILFQQG-AL 96

Query: 123 YGEKTVAENIMEALTA-AGYEGKDATEWALNLIKMVKLEHRVA-HISRDLSGGEKQRVVL 180
           +   TV +NI   +        +   E  +  + MV L+  V      +LSGG  +RV L
Sbjct: 97  FSSLTVRQNIQFPVREYLKLSQRLLDEITIAKLVMVGLKPEVIDRYPSELSGGMIKRVAL 156

Query: 181 ARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKA 240
           AR +A +P +   DEPT  LDP  A      +        + + + +H  + +   C + 
Sbjct: 157 ARALALDPELVFLDEPTSGLDPIGAGEFDELVRTLQRTLGLTVFMVTHDLDSLHTACDRI 216

Query: 241 IWLDKGEMRLVG 252
             L  G++   G
Sbjct: 217 AVLGDGKVIAAG 228