Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 545 a.a., ABC transporter ATP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  139 bits (350), Expect = 3e-37
 Identities = 134/547 (24%), Positives = 254/547 (46%), Gaps = 67/547 (12%)

Query: 3   LLEVKNVSKSY----GDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPT 58
           LL+V ++S ++    G T  + +VSF +  G+ + ++G SG+GKSV    +  +  Y P+
Sbjct: 8   LLDVSDLSVAFHQPSGTTTAVDHVSFRIKRGECVALVGESGSGKSVSALSILKLLPY-PS 66

Query: 59  SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR 118
           +     H+ +  H                  E +  S       EI      +I+I+ Q 
Sbjct: 67  ASHPSGHIRFKGH------------------ELLGMS-----EREIRGIRGNEISIVFQE 103

Query: 119 TF-ALYGEKTVAENIMEALTA-AGYEGKDATEWALNLIKMVKL---EHRVAHISRDLSGG 173
              +L    T+   I E L    G  G  A    + L+  V +   E R+A     LSGG
Sbjct: 104 PMTSLNPLHTIEAQIGEILQLHGGVRGAKARARIIELLTQVGIPEPETRLASYPHQLSGG 163

Query: 174 EKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVI 233
           ++QRV++A  +A  P + +ADEPT  LD      +   L +   +  ++M+  +H   ++
Sbjct: 164 QRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILALLADIRARLGMSMLFITHDLGIV 223

Query: 234 EELCQKAIWLDKGEMRLVGESKHVVEEFMKTVTSMKEFEKVEVKDE---------LLKLE 284
             +      +  G++   G  + V  +     T  K     E K +         ++   
Sbjct: 224 RRIADTVCVMHTGKIVEQGPVEQVFTDPQHPYT--KALLAAEPKPDPAPPCPDAPVVIST 281

Query: 285 NVEKRYVSVDRGI-------VKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPP 337
           +  K +  + RG+       +KAVDG+ ++I + E  G+VG SG+GKTTL   +  +I  
Sbjct: 282 SDLKVWFPIRRGLLRKTVGHIKAVDGVTLAIRKGETLGVVGESGSGKTTLGLALLRLI-S 340

Query: 338 SKGNYEFRLAD-EWVDMTKVGPLYRGRAKRYIGMLFQE--YSLYPHRTILYNLTESIGLE 394
           S G   F   D + +   ++ P      +R + ++FQ+   +L P  ++   + E + + 
Sbjct: 341 SDGPIVFLGKDVQGLKFKQMLPF-----RRDMQIVFQDPFGALSPRMSVGDIIAEGLSVH 395

Query: 395 MP--GEFAK-MKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLIL 451
            P  GE  +  +    L  VG   + A     ++P E S G++ R+++A+ ++ EP+ ++
Sbjct: 396 QPQLGESEREARVIKALKDVGL--DPATRF--RYPHEFSGGQRQRISIARAVVLEPNFVV 451

Query: 452 LDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTG 511
           LDEPT  +D + + Q+ + +++ + + D TY+ +SHD+  V ++     +++ GK+++ G
Sbjct: 452 LDEPTSALDMLFQAQMVDLLRELQRKRDLTYMFISHDLRVVASLASHLIVMKQGKVVEEG 511

Query: 512 KPDEIVK 518
              E+ K
Sbjct: 512 PAGELFK 518