Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 536 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  142 bits (357), Expect = 4e-38
 Identities = 132/554 (23%), Positives = 251/554 (45%), Gaps = 62/554 (11%)

Query: 3   LLEVKNVSKSYGD----TEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPT 58
           LL V+++  S+      TE ++ VSF +  G+ + ++G SG+GKSV       + G   T
Sbjct: 14  LLSVRDLRVSFRQDGKVTEAVRGVSFSVGRGETVALVGESGSGKSVSALSTVSLLGDSAT 73

Query: 59  -SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQ 117
            SG + Y           +    VG      +E   + V     N+I++  ++ +     
Sbjct: 74  VSGSVTY-----------DGTEMVG-----ASERHLRQV---RGNDISFIFQEPMT---- 110

Query: 118 RTFALYGEKTVAENIMEALTA-AGYEGKDATEWALNLIKMVKL---EHRVAHISRDLSGG 173
              +L    T+ + + E+L    G  G  A E  ++L+  V +   E R+      LSGG
Sbjct: 111 ---SLNPLHTIEKQLAESLALHQGLGGAAARERIVDLLNRVGIRDAETRLDAYPHQLSGG 167

Query: 174 EKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVI 233
           ++QRV++A  +A  P I +ADEPT  LD      + + L +      + ++  +H   ++
Sbjct: 168 QRQRVMIAMALANKPDILIADEPTTALDVTIQVQILDLLADLKASEGMGLLFITHDLSIV 227

Query: 234 EELCQKAIWLDKGEM-------RLVGESKHVVEEFMKTVTSMKEFEKVEVKD--ELLKLE 284
             +  +   +  GE+        +    +H     +       + + V  KD  EL++ E
Sbjct: 228 RRIADRVCVMQAGEIVESGPTAEIFANPQHPYTRKLLDAEPTGQPQPVS-KDAKELIRTE 286

Query: 285 N------VEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPS 338
           +      ++K ++    G VKAV+   +S+   E  G+VG SG+GKTTL+  I  +I  S
Sbjct: 287 DLKVWFPIQKGFLKRTVGHVKAVNPTSLSVRAGETLGIVGESGSGKTTLALAIMRLI-AS 345

Query: 339 KGNYEFRLAD--EWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLTESIGLEMP 396
           +G  EF+  D  +W        L R RA   I       +L P  T    + E + +   
Sbjct: 346 EGRVEFQGQDLRQW----STRDLRRLRADMQIVFQDPFGALSPRMTCAQIIAEGLAIH-- 399

Query: 397 GEFAKMKAEHTLVSVGFTEEEAE-NMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEP 455
               + +    LV+   +E   +   ++++P E S G++ R+A+A+ ++  P L++LDEP
Sbjct: 400 -NVDQDRDPRDLVAEVMSEVGLDPAFMDRYPHEFSGGQRQRIAIARAMVLRPKLVVLDEP 458

Query: 456 TGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDE 515
           T  +D   + Q+   ++  +      Y+ +SHD++ V  +  +  +++ G +++ G   E
Sbjct: 459 TSALDMTVQVQIVNLLRDLQERYGLAYLFISHDLNVVRAMSHKMIVMKQGDVVEAGSAAE 518

Query: 516 IVKILSEEEKDEMI 529
           +    S+    +++
Sbjct: 519 LFNNPSDPYTQQLL 532