Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis JJ

 Score =  239 bits (609), Expect = 3e-67
 Identities = 172/596 (28%), Positives = 284/596 (47%), Gaps = 117/596 (19%)

Query: 2   LLLEVKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQ 61
           + + V+N++K YG+   L NVSF++ +GD++G++G+SGAGK+ L+ +LRG+E ++     
Sbjct: 1   MAVTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFD----- 55

Query: 62  IIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFA 121
                         E   +V  K E             N  EIT       AI LQR FA
Sbjct: 56  --------------EGKIEVCGKTE-------------NLREIT-------AIHLQRNFA 81

Query: 122 LYGEKTVAENIMEALTAAGYEG--------------KDATEWALNLIKMVKLEHRVAHIS 167
           L+ E  +  NI+  L A   +               KDATE    ++K+V LEH+    S
Sbjct: 82  LWAEPAI-YNIIRKLYAVRTDSDEGLPLEEEMEEYRKDATE----ILKLVGLEHKKDAYS 136

Query: 168 RDLSGGEKQRVVLARQIAK-----NPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIA 222
             LSGGEKQR++L RQ+AK        + L DEP     P + + + + L     K  + 
Sbjct: 137 NILSGGEKQRLILGRQLAKIYAKGGDGVLLLDEPATMACPASKQILLDVLKNINEKLGVT 196

Query: 223 MVITSHWPEVIEELCQKAIWLDKGEMRLVGESKHVVEEFMKTVTSMKEFEKVEVKDELLK 282
           +++TSH PE+ + LC+  I ++ G++ +    ++VV+EF+K +    +      +  +++
Sbjct: 197 IIVTSHLPEIHKYLCKSCILIENGKIVMRDTPQNVVDEFLKDMVETYDRTSKPTEKTIVE 256

Query: 283 LENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNY 342
           +E+  KRY  V+ G    +  I   + EKEI  ++G SG GK+ + +++A +  P KG  
Sbjct: 257 VEDASKRYYVVNGGETLNLKDISFEVKEKEILSILGPSGTGKSVILRLLAGLEAPDKGVV 316

Query: 343 EFRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTI------------------- 383
           +     E +D+   G   R   +R IG++ QE+SL  + T+                   
Sbjct: 317 KL----EGIDLKDFG-WNRMNLRRKIGIMHQEFSLAHYLTVNELLKYRLGVKSIETVESA 371

Query: 384 ----------------LYNLTESIGLEMPGEFAKMKAEHTLVSVGFTEEEAE-------- 419
                           LY L +    EM  +  K+     +V   F  ++ E        
Sbjct: 372 KLKAAELGISPKMVDGLYQLLDLPETEMRNKLDKIGISEMVVRQLFPAKQVEYDANDLLD 431

Query: 420 ------NMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPITRNQVAESIQK 473
                   L K P+ELS GEK RVA+A  L  EP ++LLDEP G +DP+T  +V+  ++K
Sbjct: 432 ALDLNKETLNKKPTELSGGEKVRVAMALQLALEPDILLLDEPFGDLDPLTLREVSNYLKK 491

Query: 474 SRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEIVKILSEEEKDEMI 529
               +  T +++SH ++ +  + DRA L+  GK++  G P+EI +   E    + +
Sbjct: 492 INDTVGTTIILISHHVELIKEISDRAILIDEGKLLMDGNPEEICEKFIERSNSKFM 547