Pairwise Alignments
Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2
Subject, 533 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12
Score = 152 bits (383), Expect = 4e-41
Identities = 133/539 (24%), Positives = 247/539 (45%), Gaps = 58/539 (10%)
Query: 3 LLEVKNVSKSYGD----TEVLKNVSFELNEGDVMGVLGRSGAGKSVL-LHMLRGMEGYEP 57
+L+V+N+ + TE +K VSF++ +G+ + ++G SG+GKSV L + +
Sbjct: 5 VLQVRNLRVGFRQDGQVTEAVKGVSFDVAQGETVALVGESGSGKSVTALSTVSLLPDSAE 64
Query: 58 TSGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQ 117
SG I Y E V AP + ++ N++++ ++ +
Sbjct: 65 VSGSITY-----AGTEMVGAPERDLRRVR--------------GNDVSFIFQEPMT---- 101
Query: 118 RTFALYGEKTVAENIMEALTA-AGYEGKDATEWALNLIKMVKL---EHRVAHISRDLSGG 173
+L + + I E+LT G G A + L++ V + E R+ LSGG
Sbjct: 102 ---SLNPLHPLEKQITESLTLHQGLTGDAARARVIELLEKVGIRDAESRLGAYPHQLSGG 158
Query: 174 EKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVI 233
++QRV++A +A P + +ADEPT LD + + L + ++++ +H ++
Sbjct: 159 QRQRVMIAMALANGPDLLIADEPTTALDVTIQAQILDLLADLKEAEGMSLLFITHDLTIV 218
Query: 234 EELCQKAIWLDKGEMRLVGESKHVVEE-----FMKTVTSMKEFEKVEVKDELLKLENVE- 287
+ + + GE+ G + + K + + + V ++ + +
Sbjct: 219 RRIADRVCVMQGGEIVETGPTAEIFANPQHPYTRKLLAAEPSGQPDPVPEDAPVVAETDS 278
Query: 288 -KRYVSVDRGI-------VKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSK 339
K + + RGI VKAV+ +++ E G+VG SG+GKTTL+ I +I S+
Sbjct: 279 LKVWFPIQRGILRRTVGHVKAVNNATLNVRAGETLGVVGESGSGKTTLALAILRLIS-SE 337
Query: 340 GNYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLTESIGLE--MPG 397
G + A E + K L R R + SL P TI + E +G+ PG
Sbjct: 338 GRIVY--AGENIQGWKSRDLRRLRKDMQVVFQDPYGSLSPRMTIAQIIAEGLGVHGLEPG 395
Query: 398 EFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTG 457
+ LV VG M++++P E S G++ R+A+A+ +I P L++LDEPT
Sbjct: 396 ADPRRMVAEILVEVGLDPA----MMDRYPHEFSGGQRQRIAIARAMILRPKLVVLDEPTS 451
Query: 458 TMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEI 516
+D + Q+ E ++ + + Y+ +SHD+ V + + ++R G +++ G+ +I
Sbjct: 452 ALDMTVQVQIVELLRALQRKYGLAYIFISHDLKVVRALSHKVIVMRQGDVVEMGEGRQI 510
Score = 95.9 bits (237), Expect = 3e-24
Identities = 67/248 (27%), Positives = 123/248 (49%), Gaps = 13/248 (5%)
Query: 276 VKDELLKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVI 335
+ D +L++ N+ + D + +AV G+ + + E LVG SG+GK+ + +++
Sbjct: 1 MSDAVLQVRNLRVGFRQ-DGQVTEAVKGVSFDVAQGETVALVGESGSGKSVTALSTVSLL 59
Query: 336 PPSKGNYEFRLADEWVDMTKVGPLYRGRAK---RYIGMLFQE--YSLYPHRTILYNLTES 390
P S E + + VG R + + +FQE SL P + +TES
Sbjct: 60 PDSA---EVSGSITYAGTEMVGAPERDLRRVRGNDVSFIFQEPMTSLNPLHPLEKQITES 116
Query: 391 IGLE--MPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPH 448
+ L + G+ A+ + L VG +AE+ L +P +LS G++ RV +A L P
Sbjct: 117 LTLHQGLTGDAARARVIELLEKVGI--RDAESRLGAYPHQLSGGQRQRVMIAMALANGPD 174
Query: 449 LILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKII 508
L++ DEPT +D + Q+ + + + + + ++HD+ V + DR +++GG+I+
Sbjct: 175 LLIADEPTTALDVTIQAQILDLLADLKEAEGMSLLFITHDLTIVRRIADRVCVMQGGEIV 234
Query: 509 KTGKPDEI 516
+TG EI
Sbjct: 235 ETGPTAEI 242
Score = 77.8 bits (190), Expect = 9e-19
Identities = 60/253 (23%), Positives = 115/253 (45%), Gaps = 36/253 (14%)
Query: 11 KSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVL-LHMLRGMEGYEPTSGQIIYHVAYC 69
++ G + + N + + G+ +GV+G SG+GK+ L L +LR + + G+I+Y
Sbjct: 292 RTVGHVKAVNNATLNVRAGETLGVVGESGSGKTTLALAILRLIS----SEGRIVY----- 342
Query: 70 PHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTF-ALYGEKTV 128
+++ W + ++ L+K + ++ Q + +L T+
Sbjct: 343 ----------------------AGENIQGWKSRDLR-RLRKDMQVVFQDPYGSLSPRMTI 379
Query: 129 AENIMEALTAAGYE-GKDATEWALNLIKMVKLEHRVA-HISRDLSGGEKQRVVLARQIAK 186
A+ I E L G E G D ++ V L+ + + SGG++QR+ +AR +
Sbjct: 380 AQIIAEGLGVHGLEPGADPRRMVAEILVEVGLDPAMMDRYPHEFSGGQRQRIAIARAMIL 439
Query: 187 NPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWLDKG 246
P + + DEPT LD + L K+ +A + SH +V+ L K I + +G
Sbjct: 440 RPKLVVLDEPTSALDMTVQVQIVELLRALQRKYGLAYIFISHDLKVVRALSHKVIVMRQG 499
Query: 247 EMRLVGESKHVVE 259
++ +GE + + E
Sbjct: 500 DVVEMGEGRQIFE 512