Pairwise Alignments

Query, 216 a.a., DNA repair and recombination protein RadB from Methanococcus maripaludis S2

Subject, 356 a.a., recombinase A from Synechococcus elongatus PCC 7942

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 47/207 (22%), Positives = 98/207 (47%), Gaps = 25/207 (12%)

Query: 2   LEELLNGNIEKKTITQIYGPPGVGKTNICIISMLKAIENGKNVVYIDTEGSLSIERIKQL 61
           L+  L G + K  I ++YGP   GKT + + ++ +  + G    ++D E +L       +
Sbjct: 53  LDLALGGGLPKGRIIEVYGPESSGKTTLTLHAIAEVQKQGGIAAFVDAEHALDPVYATSV 112

Query: 62  SGKDCDELLKNIIIYEPSSFEEQSEALEKIFLLENVGLIIIDGIVSLY-RLELCDKINEN 120
            G D D    N++I +P + E   E ++++     V +++ID + +L  R E+     E 
Sbjct: 113 -GVDID----NLLISQPDTGEMALEIVDQLVRSAAVDIVVIDSVAALVPRAEI-----EG 162

Query: 121 TKLNRMLGKQISNLLKVSRQKNSG--------ILITNQVKDSI-----NGIEPAGGRLLE 167
              +  +G Q + L+  + +K +G        ++  NQ++  I     +     GG+ L+
Sbjct: 163 EMGDAQVGLQ-ARLMSQAMRKITGNIGKSGCTVIFLNQLRQKIGVTYGSPETTTGGQALK 221

Query: 168 YWSKSIIKIEKSESIRKLTLEKHRHAK 194
           +++   + I + ++++K T E    AK
Sbjct: 222 FYASVRLDIRRIQTLKKGTEEYGTRAK 248