Pairwise Alignments

Query, 216 a.a., DNA repair and recombination protein RadB from Methanococcus maripaludis S2

Subject, 361 a.a., recombinase A from Sinorhizobium meliloti 1021

 Score = 57.4 bits (137), Expect = 3e-13
 Identities = 46/207 (22%), Positives = 101/207 (48%), Gaps = 19/207 (9%)

Query: 8   GNIEKKTITQIYGPPGVGKTNICIISMLKAIENGKNVVYIDTEGSLSIERIKQLSGKDCD 67
           G + K  I +IYGP   GKT + + ++ +A + G    ++D E +L     ++L G D  
Sbjct: 65  GGLPKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKL-GVD-- 121

Query: 68  ELLKNIIIYEPSSFEEQSEALEKIFLLENVGLIIIDGIVSLY-RLELCDKINENT--KLN 124
             L+N++I +P + E+  E  + +     + +++ID + +L  R E+  ++ ++      
Sbjct: 122 --LENLLISQPDTGEQALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQA 179

Query: 125 RMLGKQISNLLKVSRQKNSGILITNQVKDSINGI-----EPAGGRLLEYWSKSIIKIEKS 179
           R++ + +  L     + N  ++  NQ++  I  +        GG  L++++   ++++  
Sbjct: 180 RLMSQALRKLTASISKSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYAS--VRLD-- 235

Query: 180 ESIRKLTLEKHRHAKEGENLRFKILQN 206
             IR++   K R    G   R K+++N
Sbjct: 236 --IRRIGSVKEREEVVGNQTRVKVVKN 260