Pairwise Alignments

Query, 216 a.a., DNA repair and recombination protein RadB from Methanococcus maripaludis S2

Subject, 340 a.a., protein RecA from Dechlorosoma suillum PS

 Score = 48.9 bits (115), Expect = 1e-10
 Identities = 39/185 (21%), Positives = 89/185 (48%), Gaps = 13/185 (7%)

Query: 8   GNIEKKTITQIYGPPGVGKTNICIISMLKAIENGKNVVYIDTEGSLSIERIKQLSGKDCD 67
           G + +  + +IYGP   GKT + +  + +  + G    +ID E +L  +  ++L G +  
Sbjct: 54  GGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTAAFIDAEHALDPQYAQKL-GVNIG 112

Query: 68  ELLKNIIIYEPSSFEEQSEALEKIFLLENVGLIIIDGIVSLY-RLELCDKINENTK--LN 124
           ELL    I +P + E+  E  + +     V +I++D + +L  + E+  ++ ++      
Sbjct: 113 ELL----ISQPDNGEQALEIADMLVRSGGVDVIVVDSVAALTPKAEIEGEMGDSMMGLHA 168

Query: 125 RMLGKQISNLLKVSRQKNSGILITNQVKDSINGI-----EPAGGRLLEYWSKSIIKIEKS 179
           R++ + +  L    ++ N+ ++  NQ++  I  +        GG  L++++   + I + 
Sbjct: 169 RLMSQALRKLTANIKKTNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRI 228

Query: 180 ESIRK 184
             I+K
Sbjct: 229 GGIKK 233