Pairwise Alignments

Query, 430 a.a., tRNA pseudouridine(13) synthase TruD from Methanococcus maripaludis S2

Subject, 346 a.a., Uncharacterized conserved protein from Pseudomonas stutzeri RCH2

 Score = 61.6 bits (148), Expect = 4e-14
 Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 17/162 (10%)

Query: 59  LKKYPEDFIVEEITPEGTVLEVGKEIGFEDVEKWHGSFIHFTVEKTNWNTMDALKQIVRA 118
           LK   EDF V+E      VL++      E +  W        VEK N NT +A K+I RA
Sbjct: 21  LKAVAEDFQVDE------VLDIPLSGEGEHLWLW--------VEKRNLNTEEAAKRIARA 66

Query: 119 TKTKRKNFGFAGTKDKFAVTTQRFGCF--GLKKEQLENINIKDIVIRDVQKTNKKLRMGG 176
                K   +AG KD+ A+T Q F     G     L       + I    +  +KL+ G 
Sbjct: 67  AGVPLKMISYAGLKDRQALTRQWFSLHLPGKADPDLAAAESDGLAILKRTRHQRKLQRGA 126

Query: 177 LWGNKFTIKIRDLNLSEKEI-KRISDLKLDYVLNYYGIQRFG 217
              N F +++R L      +  R+  +K++ V NY+G+QRFG
Sbjct: 127 HSANGFRLRLRALQGEHAALDARLQRIKVNGVPNYFGLQRFG 168