Pairwise Alignments

Query, 174 a.a., RNA 2' 3'-cyclic phosphodiesterase from Methanococcus maripaludis S2

Subject, 178 a.a., 2'-5' RNA ligase from Azospirillum brasilense Sp245

 Score = 72.0 bits (175), Expect = 5e-18
 Identities = 45/179 (25%), Positives = 89/179 (49%), Gaps = 11/179 (6%)

Query: 1   MRCFLAIELKTDLKENLEVLKKQFNLKGIKTVEKENLHITVKFLGDIDDKKLEEIVNSDL 60
           +R F+A++   D++  L  L     + G +  + +NLH+T++F+G++ + +  EI  S  
Sbjct: 2   IRLFVALDFPEDVRRRLAGLGG--GVPGARWTDADNLHLTLRFIGEVPEDQAAEIDESLA 59

Query: 61  KIKKVISE--IKGVGTFPNEEYIRVIWVGTTN---LQETFKNIDEKLFKLGF-KKEKSYD 114
           +I     +  + GVG + +    RV+W G      L      ++  L + G   +E+ + 
Sbjct: 60  QIAAPAFDLVLDGVGVYGSGRNARVLWAGVERSDALSHLQSKVESALVRCGLPAEERKFS 119

Query: 115 PHITLGRVKFIENDSKETLKKLIEKNKHVNFGKIEINSVSLMKSTLTKNGPVYETVKKW 173
           PH+TL R+K   +  K+ + + +E+      G I +   +L +S L K   VYE + ++
Sbjct: 120 PHVTLARLK---DAPKDRIGRFVEERGMFRAGPIRVEHFTLYRSHLGKGAAVYEALSEY 175