Pairwise Alignments

Query, 174 a.a., RNA 2' 3'-cyclic phosphodiesterase from Methanococcus maripaludis S2

Subject, 195 a.a., 2'-5' RNA ligase from Sinorhizobium meliloti 1021

 Score = 54.7 bits (130), Expect = 9e-13
 Identities = 34/128 (26%), Positives = 70/128 (54%), Gaps = 9/128 (7%)

Query: 2   RCFLAIELKTDLKENLEVLKKQFNLKGIKTVEKENLHITVKFLGDIDDKKLEEIVNSDLK 61
           R F A+E+  +   +L +L+    L G + ++ EN HIT++F+GD+D +  +EI++   +
Sbjct: 3   RLFTALEIPRNAAMSLSLLRG--GLPGARWIDVENYHITLRFIGDVDWRTADEIIDRLDR 60

Query: 62  IKK--VISEIKGVGTFPNEEYIRVIWVGTTNLQETF---KNIDEKLFKLGFKKE-KSYDP 115
           I++     ++ G G F +++    +W G +   E F     I+    ++G   + + + P
Sbjct: 61  IERPEFQLQLSGTGAFGSKK-PHSVWAGVSIAPEMFALQAEIERICQRIGLPSDPRKFTP 119

Query: 116 HITLGRVK 123
           H+TL R++
Sbjct: 120 HVTLARLR 127