Pairwise Alignments

Query, 258 a.a., RlmE family RNA methyltransferase from Methanococcus maripaludis S2

Subject, 263 a.a., Ribosomal RNA methyltransferase RrmJ/FtsJ (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (268), Expect = 2e-28
 Identities = 70/203 (34%), Positives = 102/203 (50%), Gaps = 6/203 (2%)

Query: 7   RWVLQRKNDHYYNLAKRRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAA-- 64
           RW+ ++ ND Y   AKR+  RSRA +KL +L+E+F L+K    VVDLG APGGW Q A  
Sbjct: 51  RWLQRQLNDPYVLEAKRQGLRSRAAFKLIELDERFTLLKPGMRVVDLGAAPGGWTQIAVE 110

Query: 65  --RDIVGEDGFIVGIDLQTVKPLPHDNIIAIKGDMTKEEILKQAKDLLPEKPDVIICDAS 122
             R +    G +VG+D+   + +       +  D   +      K  +    D+++ D +
Sbjct: 111 RTRSLHPNGGKVVGMDILEWEGVA--GATCLTHDFMDDAAPLMLKGAMDGAVDLVLSDMA 168

Query: 123 PNISGVWDVDHVRSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQLVSEYFDKAF 182
              +G    DH+R + L   A   A ++L  GG FV KVFQG      +  + +  +   
Sbjct: 169 APTTGHRQTDHLRVMGLAEAAWYFAEEVLAPGGAFVCKVFQGGTEGALLTRMKKMCEVIR 228

Query: 183 TTKPRASRDESAEVYVIGKRFNG 205
             KP ASR  S EVYVI + F G
Sbjct: 229 HAKPPASRQGSPEVYVIAQGFRG 251