Pairwise Alignments

Query, 258 a.a., RlmE family RNA methyltransferase from Methanococcus maripaludis S2

Subject, 210 a.a., 23S rRNA methylase from Dechlorosoma suillum PS

 Score =  149 bits (377), Expect = 3e-41
 Identities = 80/201 (39%), Positives = 124/201 (61%), Gaps = 3/201 (1%)

Query: 3   KKDKRWVLQRKNDHYYNLAKRRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQ 62
           K  K W+ +  NDH+ + AK   +RSRA++KL ++++K  L+K   VVVDLG APGGW Q
Sbjct: 5   KTSKAWLQEHVNDHFVHRAKAEGWRSRASFKLLEIDDKDKLLKPGEVVVDLGAAPGGWCQ 64

Query: 63  AARDIVGEDGFIVGIDLQTVKPLPHDNIIAIKGDMTKEEILKQAKD-LLPEKPDVIICDA 121
            A   VGE G +  IDL  ++ +    +  ++GD  +E +L++ +  L   +  +++ D 
Sbjct: 65  VAVQRVGEGGKVFAIDLLEMQGIA--GVDFMQGDFREESVLREFESRLAGRQVGLVLSDM 122

Query: 122 SPNISGVWDVDHVRSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQLVSEYFDKA 181
           +PNISGV   D  RS+ L  +AL  A + LK  G F+VKVFQG  F +++  + E F+  
Sbjct: 123 APNISGVNVSDQARSIYLCELALEFAREHLKPDGAFLVKVFQGSGFNEFLAAMRETFEVV 182

Query: 182 FTTKPRASRDESAEVYVIGKR 202
            T KP++SRD S E+Y++G+R
Sbjct: 183 ATRKPKSSRDRSPELYLLGRR 203