Pairwise Alignments

Query, 258 a.a., RlmE family RNA methyltransferase from Methanococcus maripaludis S2

Subject, 209 a.a., 23S rRNA (uridine(2552)-2'-O)-methyltransferase from Klebsiella michiganensis M5al

 Score =  127 bits (319), Expect = 2e-34
 Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 13/206 (6%)

Query: 2   GKK----DKRWVLQRKNDHYYNLAKRRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAP 57
           GKK      RW+ +  +D Y   A+++  RSRA +KL ++ +   + K    +VDLG AP
Sbjct: 3   GKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKIFKPGMTIVDLGAAP 62

Query: 58  GGWLQAARDIVGEDGFIVGIDLQTVKPLPHDNIIAI---KGDMTKEEILKQAKDLLPE-K 113
           GGW Q A   +G  G I+  DL     LP D I+ +   +GD   E +LK   + + + K
Sbjct: 63  GGWSQYAVTQIGNSGRIIACDL-----LPMDPIVGVDFLQGDFRDELVLKALLERVGDSK 117

Query: 114 PDVIICDASPNISGVWDVDHVRSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQL 173
             V++ D +PN+ G   VD  R++ L  +AL  A  +L  GG+FVVKVFQG+ F++Y++ 
Sbjct: 118 VQVVMSDMAPNMCGTPAVDIPRAMYLVELALGMARDVLAPGGSFVVKVFQGEGFDEYLRE 177

Query: 174 VSEYFDKAFTTKPRASRDESAEVYVI 199
           +   F K    KP +SR  S EVY++
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIV 203