Pairwise Alignments

Query, 258 a.a., RlmE family RNA methyltransferase from Methanococcus maripaludis S2

Subject, 220 a.a., ribosomal RNA large subunit methyltransferase E from Burkholderia phytofirmans PsJN

 Score =  129 bits (323), Expect = 7e-35
 Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 15/212 (7%)

Query: 3   KKDKRWVLQRKNDHYYNLAKRRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQ 62
           K +  W+    ND Y  +A+R  YR+RA YKL +++E+  LI+   V+VDLG  PG W Q
Sbjct: 5   KFNTAWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDRLIRPGQVIVDLGSVPGSWSQ 64

Query: 63  AARDIV------------GEDGFIVGIDLQTVKPLPHDNIIAIKGDMTKEEILKQAKDLL 110
            AR+ +            G DG I+ +D+  ++P+   ++  I+GD  ++ +L Q ++L+
Sbjct: 65  YARNKLAKGAQRDAEREGGIDGTIIALDILPMEPIA--DVTFIQGDFREDTVLGQLEELV 122

Query: 111 PEKP-DVIICDASPNISGVWDVDHVRSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEK 169
            E+  D++I D +PN+SGV   D  R   L  +AL  +   LK+ G  +VK F G  + +
Sbjct: 123 GERQVDLVISDMAPNLSGVAVADAARIEHLCDLALEFSQNHLKQDGALLVKCFHGSGYSQ 182

Query: 170 YVQLVSEYFDKAFTTKPRASRDESAEVYVIGK 201
            V+     F      KP+ASRD+S+E +++GK
Sbjct: 183 IVEKFKHQFKVVAARKPKASRDKSSETFILGK 214