Pairwise Alignments

Query, 227 a.a., class III signal peptide-containing protein from Methanococcus maripaludis S2

Subject, 227 a.a., class III signal peptide-containing protein from Methanococcus maripaludis JJ

 Score =  408 bits (1048), Expect = e-119
 Identities = 204/227 (89%), Positives = 215/227 (94%)

Query: 1   MAKFSKGQISIELILLMTAVLLAGILVSVNMTRFTFEGDILSDVREDAFQVFEISTDTPI 60
           MAKFSKGQISIELILLM AVLLAGILVS +MT+FTFEGDILSDVRE  +QVF IS   P 
Sbjct: 1   MAKFSKGQISIELILLMMAVLLAGILVSFHMTKFTFEGDILSDVREGTYQVFAISIYEPP 60

Query: 61  IVYSLNFSNVKISPSTNLYNAWLQINDTGNDTYLWYYSDGTFKGLANTSDPDESITEENL 120
           I YSLNFS+VKISPSTNL NAWLQINDTGNDTYLWYYSDGTFKGLANTSDP ES+TE+NL
Sbjct: 61  IYYSLNFSDVKISPSTNLENAWLQINDTGNDTYLWYYSDGTFKGLANTSDPGESVTEDNL 120

Query: 121 VLLPHEGYASDIIFRSNVPTAMSWDSYEIDFNDIKKFEIIANDVENNPISYSLTHGDSPE 180
           VLLPHEGYASDIIFRSN+PTAMSW+SYE+DFNDIKKFEIIANDVENNPISYSLTHGDSPE
Sbjct: 121 VLLPHEGYASDIIFRSNIPTAMSWNSYELDFNDIKKFEIIANDVENNPISYSLTHGDSPE 180

Query: 181 TSNQAYLNIKANEVTIIVTKANDKVFEVIANTTSGTIELLPYTETSP 227
           TSNQAYLNIKAN+VTIIVTKAN+KVFEVIANTTSGTIELLPYTETSP
Sbjct: 181 TSNQAYLNIKANDVTIIVTKANNKVFEVIANTTSGTIELLPYTETSP 227