Pairwise Alignments

Query, 476 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 476 a.a., Pre-mRNA processing ribonucleoprotein from Methanococcus maripaludis JJ

 Score =  944 bits (2441), Expect = 0.0
 Identities = 472/476 (99%), Positives = 474/476 (99%)

Query: 1   MLFIAFAPFGAFALEANSKNDGYSLDDIKYYKIFENEDIPKIMYALRQGDFEIIAELKNE 60
           MLFIAFAPFGAFALEANSKNDGYSLDDIKYYKIFENEDIPKIMYALRQGDFEIIAELKNE
Sbjct: 1   MLFIAFAPFGAFALEANSKNDGYSLDDIKYYKIFENEDIPKIMYALRQGDFEIIAELKNE 60

Query: 61  WEIEEEDVSFEYTTSKNPLGELIRDNLYELGQKYEVFEDESDFVSKMNVWATAFTKSMMK 120
           WEIEEEDVSFEYTTSKNPLGELIRDNLYELGQKYEVFEDESDFVSKMNVWATAFTKSMMK
Sbjct: 61  WEIEEEDVSFEYTTSKNPLGELIRDNLYELGQKYEVFEDESDFVSKMNVWATAFTKSMMK 120

Query: 121 KSSEQKDKLIVQTVNALDNLDETLNLFSERLREWYSLYFPEMDNIVKKHDIYVSLVSEYG 180
           KSSEQKDKLIVQTVNALDNLDETLNLFSERLREWYSLYFPEMDNIVKKHDIYVSLVSEYG
Sbjct: 121 KSSEQKDKLIVQTVNALDNLDETLNLFSERLREWYSLYFPEMDNIVKKHDIYVSLVSEYG 180

Query: 181 DREEYTRTKLKKTMPSNVARTISLAAKESMGADVSEFDLKIMKNLADEIKSMYEYRESLQ 240
           DREEYTRTKLKKTMPSNVARTISLAAKESMGADVSEFDLKIMKNLADEIKSMYEYRESLQ
Sbjct: 181 DREEYTRTKLKKTMPSNVARTISLAAKESMGADVSEFDLKIMKNLADEIKSMYEYRESLQ 240

Query: 241 EYLETSMNEIAPNLTKVAGASLGARLISLAGGIERLLRLPASTIQVIGAEKALFAHLRER 300
           EYLETSMNEIAPNLTKVAGASLGARLISLAGGIERLLRLPASTIQVIGAEKALFAHLRER
Sbjct: 241 EYLETSMNEIAPNLTKVAGASLGARLISLAGGIERLLRLPASTIQVIGAEKALFAHLRER 300

Query: 301 ALPPKHGVIFQHPLIQGSPWWIHGKIARAISCKISIAIRADAFGNDISDMLIEDMNKKVA 360
           ALPPKHGVIFQHPLIQGSPWWIHGKIARAISCKISIAIRADAFGNDISDMLIEDMNKKVA
Sbjct: 301 ALPPKHGVIFQHPLIQGSPWWIHGKIARAISCKISIAIRADAFGNDISDMLIEDMNKKVA 360

Query: 361 EIKEKFPEPTRKRRPRPDTRSFGNKGGQDRDRRSQGDRKPSGNRGDSKKGGKPFGKKPAG 420
           +IKEKFPEPTRKRRPRPDTRSFGNKGGQDRDRRSQGDRKP G RGDSKKGGKPFGKKPAG
Sbjct: 361 QIKEKFPEPTRKRRPRPDTRSFGNKGGQDRDRRSQGDRKPQGKRGDSKKGGKPFGKKPAG 420

Query: 421 KDDRRDNRKGDRKPFGGKPKNSGNQPPKERSGEKRRDSTKKVKAERKVIGKTSSQN 476
           KDDRRDNRKGDRKPFGGKPKNSGNQPPKE+SGEKRRDSTKKVKAERKVIGKTSSQN
Sbjct: 421 KDDRRDNRKGDRKPFGGKPKNSGNQPPKEKSGEKRRDSTKKVKAERKVIGKTSSQN 476