Pairwise Alignments

Query, 389 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 587 a.a., transporter, CPA2 family from Pseudomonas syringae pv. syringae B728a

 Score =  103 bits (257), Expect = 1e-26
 Identities = 90/380 (23%), Positives = 176/380 (46%), Gaps = 25/380 (6%)

Query: 9   IILTSIFIVPQILKRFNVPTITATMLAGILIGPFG--LNIIQSSATLDTFAAFGVIFLMF 66
           +I+    +V  +  R   P +   ++AG +IGP     ++I    T+   A  GVIFLMF
Sbjct: 12  VIMLVAGVVTILFHRLRQPVVLGYIVAGFIIGPHTPPFSLIHDEETIKILAELGVIFLMF 71

Query: 67  LAGLEVDNETLKDEFKNSLVLSLFSMLIPSIGGYLIGQYFGLDFIGSLLYAVIFSSHSVG 126
             GLE     L      + + +   + +    GY IGQ+FG   + SL    I +  S  
Sbjct: 72  CLGLEFSLRKLFKVGATAFIAAFLEIALMIWIGYEIGQFFGWKTMDSLFLGAILAISSTT 131

Query: 127 IVYALMDELGLIKSRFGTTVISASVVIDLISLIVISIL--IKMGGSGITSDIIPFVVLIA 184
           I+   +++L +   RF   +    +V D++ + +I++L  I + GS  + ++   V  ++
Sbjct: 132 IIVKALNDLKMKNQRFAQLIFGVLIVEDILGIGIIALLSGIAVSGSVSSGEVFSTVGKLS 191

Query: 185 AYIIALLIIIPLISKLILKELKKFHVQKIHFILLIILISIIVG-----EHIGIHPIIGAF 239
            ++I  L+I  L+   +L  + +F   +   +LLI ++ +  G       +    ++GAF
Sbjct: 192 LFMIVALVIGILVVPRLLSYVARFESNE---MLLITVLGLCFGFCLLVVKLEYSMVLGAF 248

Query: 240 IIG--IAVSEELTKEEHDQILNENLNAIGYGIFIPLFFLNLGMTTDISVIFNFDNISLIL 297
           +IG  +A S EL K E    L E +      +F  +FF+ +G+  D  ++  +    + +
Sbjct: 249 LIGAIMAESRELLKIER---LIEPVR----DMFSAIFFVAIGLLIDPGILLQY-AWPIAV 300

Query: 298 VSVVTLIGLKISSGYFSLRILDYGKLKSFCG-GLLTVPSLTASLVGATLGRDLGILPEKF 356
           ++V  ++G  +S G  +    + G+     G GL  +     S + A LG  L +  +  
Sbjct: 301 ITVAVVLGKMLSCGLGAFIAGNDGRTSLRVGMGLSQIGEF--SFIIAALGMTLQVTSDFL 358

Query: 357 FVSVVVIALLTSTVAPIYVK 376
           +   V ++ +T+ + P  ++
Sbjct: 359 YPVAVAVSAITTLLTPYLIR 378