Pairwise Alignments

Query, 389 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 460 a.a., Na+/H+ antiporter from Synechococcus elongatus PCC 7942

 Score =  100 bits (249), Expect = 8e-26
 Identities = 88/399 (22%), Positives = 185/399 (46%), Gaps = 53/399 (13%)

Query: 19  QILKRFNVPTITATMLAGILIGPFGLNII------------------------------- 47
           ++  R N+P +   +L G+L+G   L ++                               
Sbjct: 51  ELCVRVNLPPVLGELLGGVLVGTSVLRLLVFPSSGAGAEDVVLLNFLQQISGAPDNWMPT 110

Query: 48  ---QSSATLDTFAAFGVIFLMFLAGLEVDNETLKDEFKNSLVLSLFSMLIPSIGGYLIGQ 104
                S  +   +  GVI L+F  GLE + + L      + ++++  +  P   G L   
Sbjct: 111 IFATQSEVISVLSEIGVIILLFEIGLESNLDELLKVGTKAAIVAVVGVAAPFAAGTLGLI 170

Query: 105 Y-FGLDFIGSLLYAVIFSSHSVGIVYALMDELGLIKSRFGTTVISASVVIDLISLIVISI 163
           Y F +  I ++      ++ S+GI   ++ ELG + S  G  +I A+++ D++ +IV+++
Sbjct: 171 YLFHIATIPAVFAGAALTATSIGITAKVLSELGRLNSPEGQIIIGAAIIDDILGIIVLAV 230

Query: 164 LIKMGGSG--ITSDIIPFVVLIAAYIIALLIIIPLISKLILKELKKFHVQKIHFILLII- 220
           +  +  +G    S+I+  +V   A+++  + I   ++   +  +     +    ++ ++ 
Sbjct: 231 VSSLAKTGEIRPSNIVILIVSSTAFLVGAIFIGRWLNPFFVNLVSSMQTRGEVLVVALVA 290

Query: 221 -LISIIVGEHIGIHPIIGAFIIGIAVSEELTKEEHDQILNENLNAIGYGIFIPLFFLNLG 279
            +++ ++ + + +  I+GAF +G+ ++E    EE    L E +  +   + +P+FF+ +G
Sbjct: 291 AILAGLIAQFVRLEAILGAFAVGLILAETEKGEE----LKEQVKPLA-DVLVPIFFVVVG 345

Query: 280 MTTDISVIFNFDNIS---LILVS---VVTLIGLKISSGYFSLRILDYGKLKSFCGGLLTV 333
             TD+SV+   D ++   LI+     VV ++G K+ +G FSL +     L     G+  +
Sbjct: 346 AKTDLSVLNPADPVNRAGLIIAGFLLVVAVLG-KVITG-FSL-VGSSTPLNRLAIGVGMI 402

Query: 334 PSLTASLVGATLGRDLGILPEKFFVSVVVIALLTSTVAP 372
           P     LV A +G   GIL E     V+V+ ++T+ +AP
Sbjct: 403 PRGEVGLVFAGVGASSGILSESLNAGVIVMVIMTTFLAP 441