Pairwise Alignments

Query, 389 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 715 a.a., Na+/H+ antiporter from Synechococcus elongatus PCC 7942

 Score =  102 bits (253), Expect = 5e-26
 Identities = 104/403 (25%), Positives = 188/403 (46%), Gaps = 59/403 (14%)

Query: 9   IILTSIFIVPQILKRFNVPTITATMLAGILIGPFGLNIIQ-----------SSATLDTFA 57
           +++    ++  ++ RF  P +   + AGIL+GP  L  I            S + L+  A
Sbjct: 15  VVILCSRLLGSLVHRFGQPLVVGEIAAGILLGPSFLGAIAPKLELAIFPQASGSYLELLA 74

Query: 58  AFGVIFLMFLAGLEVDNETLKDEFKNSLVLSLFSMLIPSIGGYLIGQYFGL--------- 108
             G+IF MFL GLE++ + L+   + +L +S  S+L+P   G  IG   GL         
Sbjct: 75  QVGLIFFMFLIGLELNPQYLRGRLRLALWVSNLSVLLPF--GLGIGLAIGLQRFYPAILV 132

Query: 109 DFIG----SLLYAVIFSSHSVGIVYALMDELGLIKSRFGTTVISASVVIDLISLIVISIL 164
             +G    SL   V  S  +  ++  ++ E  L ++  G+  ++ + + DL +  +++I 
Sbjct: 133 QGVGLLPVSLFLGVALSITAFPVLARILTERNLQRTPLGSLALTCAAIDDLTAWCLLAIA 192

Query: 165 IKMGGSGITSDIIPFVVLIAAYIIALLI-----IIPLISKLILKELKKFHVQKIHFILLI 219
           I +  +      IP +VL   Y   +L      +  +IS+   +  +   V  +  I + 
Sbjct: 193 IAVTRTNSMVAAIPTIVLAMLYCGGMLTMGRRWLGNVISRWYARSGELSQV-LLATIYMG 251

Query: 220 ILISIIVGEHIGIHPIIGAFIIGI------AVSEELTKEEHDQILNENLNAIGYGIFIPL 273
           +L+S ++ E IGIH I GAF++G+      A++ +L     D +L          I +P+
Sbjct: 252 VLVSALLTELIGIHFIFGAFLLGVILPKNQALTRDLALRTEDFVLT---------ILLPV 302

Query: 274 FFLNLGMTTDISVIFNFDNISLI--LVSVVTLIGLKISSGYFSLRILDYGKLK----SFC 327
           FF   G+ TD+S + N   +  I  L+ VV + G K+   Y + R   +G +        
Sbjct: 303 FFAYSGLRTDLSRL-NQPALWFIGGLILVVAIAG-KVGGAYLAAR---WGNMSVREAQTL 357

Query: 328 GGLLTVPSLTASLVGATLGRDLGILPEKFFVSVVVIALLTSTV 370
           G L+    LT  LV   +G  LG++  + F  +V++AL+T+ +
Sbjct: 358 GWLMNTRGLT-ELVVLNIGLSLGVISSELFTLLVIMALVTTVM 399