Pairwise Alignments

Query, 389 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 408 a.a., Na+/H+ antiporter from Synechococcus elongatus PCC 7942

 Score =  136 bits (342), Expect = 1e-36
 Identities = 95/369 (25%), Positives = 185/369 (50%), Gaps = 10/369 (2%)

Query: 9   IILTSIFIVPQILKRFNVPTITATMLAGILIGPFGLNIIQSSA-TLDTFAAFGVIFLMFL 67
           +++T++F+ P + +   +P +   +LAG+L+GP   NI++  A T+   A  G ++LMFL
Sbjct: 20  LLMTALFL-PPLFRALKLPELLGLILAGVLLGPSLFNILEPKADTVVLLAGIGKLYLMFL 78

Query: 68  AGLEVDNETLKDEFKNSLVLSLFSMLIPSIGGYLIGQYFGLDFIGSLLYAVIFSSHSVGI 127
           AGLE+D    +     SL     +  IP + G LIG  FG  +  + L   + +SH++ +
Sbjct: 79  AGLEIDLSQFQAARDRSLRFGFATFAIPLLVGLLIGLGFGFGWNSAFLIGSLLASHTL-L 137

Query: 128 VYALMDELGLIKSRFGTTVISASVVIDLISLIVISI-LIKMGGSGITSDIIPFVVLIAAY 186
              +++  GL++ R     + A++  D+ +L+V+++ L    G G    I+  +++ + +
Sbjct: 138 TLPIVEHYGLLRQRAVAATLGATIFTDIGALLVLAVCLAVQSGDGGLIAIVRDLLIFSVF 197

Query: 187 IIALLIIIPLISKLILKELKKFHVQKIHFILLIILISIIVGEHIGIHPIIGAFIIGIAVS 246
           I  +L  +  +S+   +        +  FI L++L+  +  + I +  IIGAF+ G+AV+
Sbjct: 198 ITLVLYGVKPLSRWFFRLAHNNERNQFLFIFLVLLLVSLGAQAIQLDMIIGAFLAGLAVN 257

Query: 247 EELTKEEHDQILNENLNAIGYGIFIPLFFLNLGMTTDISVIFNFDNI--SLILVSVVTLI 304
           E L     D+ + E ++  G  +F+P FF+++G+  + +  +       SL    V  L 
Sbjct: 258 ETL----QDEPVREKVDFFGKVMFLPCFFIDIGLLLNPAAFWETLTTAGSLTFAIVGGLF 313

Query: 305 GLKISSGYFSLRILDYGKLKSFCGGLLTVPSLTASLVGATLGRDLGILPEKFFVSVVVIA 364
           G K  +     +   Y   +      L++P + A+L  A  G    +L    F S++ + 
Sbjct: 314 GSKFLAAIAVKQWEGYSWPEVRLMWSLSLPQVAATLAAAQAGLQAQLLSPAVFDSIIALV 373

Query: 365 LLTSTVAPI 373
           L+T  V P+
Sbjct: 374 LITVLVGPL 382