Pairwise Alignments

Query, 389 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 641 a.a., putative TrkA family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 66/301 (21%), Positives = 136/301 (45%), Gaps = 27/301 (8%)

Query: 7   FFIILTSIFIVPQILKRFNVPTITATMLAGILIGPFGLNIIQSSATLDTFAAFGVIFLMF 66
           F  +L ++  VP + KR  + ++   ++AG+ IGP    + Q + ++  FA FGV+ ++F
Sbjct: 9   FVYLLAAVLAVP-LAKRLGLGSVLGYLVAGVAIGPLLGLVGQETQSIQHFAEFGVVLMLF 67

Query: 67  LAGLEVDNETLKDEFKNSLVLSLFSMLIPSIGGYLIGQYFGLDFIGSLLYAVIFSSHSVG 126
           L GLE+D + L    +  L L    +L+ +     +       +  +L   +IF+  S  
Sbjct: 68  LVGLELDAKQLWQMRQRLLGLGGLQVLLTTGAVAGLALILNQPWQIALALGMIFAMSSTA 127

Query: 127 IVYALMDELGLIKSRFGTTVISASVVIDLISLIVISILIKMGGSGITSDI----IPFVVL 182
           IV    +E GL K+  G    S  +  D+  + +++IL  +  S    D     +  V  
Sbjct: 128 IVLQSFNEKGLAKTEGGRGGFSVLLFQDIAVIPILAILPLLALSAPQLDAGHEDMSLVAG 187

Query: 183 IAAYIIALLII--------------IPLISKLILKELKKFHVQKIHFILLIILISIIVGE 228
           + A+  AL+++               PL   +    L++  V     ++++I I+ ++  
Sbjct: 188 LPAWANALVVLGAIAAVVFGGRFLTRPLFGYVARSGLRE--VFTAAALMMVIGIAALM-S 244

Query: 229 HIGIHPIIGAFIIGIAVSEELTKEEHDQILNENLNAIGYGIFIPLFFLNLGMTTDISVIF 288
            +G+ P +G F+ G+ ++    + E +  +         G+ + LFF+ +G   D  ++ 
Sbjct: 245 LVGLSPALGTFLAGVVLASSEFRHELESTIEP-----FKGLLLGLFFITVGAGIDFEMLL 299

Query: 289 N 289
           +
Sbjct: 300 S 300