Pairwise Alignments

Query, 389 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 397 a.a., sodium/hydrogen exchanger (RefSeq) from Shewanella loihica PV-4

 Score =  118 bits (296), Expect = 3e-31
 Identities = 102/396 (25%), Positives = 192/396 (48%), Gaps = 24/396 (6%)

Query: 5   FLFFIILTSIF--IVPQILKRFNVPTITATMLAGILIGPFGLNIIQSSATLDTFAAFGVI 62
           F+  + L  +F  ++ +  KR  +P +   +LAGILIGP  L  I    TL   A  GVI
Sbjct: 6   FVLSLCLILLFGRVLGEAFKRLQLPAVVGEILAGILIGPSLLGWIAPHETLAVMAELGVI 65

Query: 63  FLMFLAGLEVDNETLKDEFKNSLVLSLFSMLIPSIG-GYLIGQYFGLDFIGSLLYAVIFS 121
            L+F  G E   + L     ++  ++L  + +P++  G +   Y  L    +L      +
Sbjct: 66  LLLFSIGCETSIKHLFQAGNSAAGVALLGIALPAVVIGLVCLLYLDLPGFTALYLGCALT 125

Query: 122 SHSVGIVYALMDELGLIKSRFGTTVISASVVIDLISLIVISILIKMGGSGITSDIIPFVV 181
           + S+GI   +M +    +S+ G  ++ A+V+ D+  +I++S+L     SG    +IP  +
Sbjct: 126 ATSIGISVRVMAQAKQSQSQEGHIILGAAVIDDIAGVILLSLLFNFASSGEVG-LIPSGL 184

Query: 182 LIAAYIIALLIIIPLISKLILKELK----KFHVQKIHFILLIILISIIVGEHIGIH--PI 235
           LI   I+  L++ P +++L+L   +    K        I+ +ILI +       +H   +
Sbjct: 185 LILK-IVGFLLLAPPMARLLLYLFRAVKPKEEETGYEAIVTMILICLFAWLAHALHAPAL 243

Query: 236 IGAFIIGIAVSEELTKEEHDQILN--------ENLNAIGYGIFIPLFFLNLGMTTDISVI 287
           +G F +G+A+S +     +  + N        E  +     IF P+FF+ +G++ D+S I
Sbjct: 244 LGGFAVGLALSRQFISPLNRYLQNPFAFTHEMEVESKPLVDIFAPIFFVYVGISLDLSQI 303

Query: 288 -FNFDNISLILVSVVTLIGLKISSGYFSLRILDYGKLKSFCGGLLTVPSLTASLVGATLG 346
              +  +  +L+  +  I  K+ +G   LR+  + + K+  G  + VP     LV A +G
Sbjct: 304 DLGWSGLLTLLMLSLLAIITKMMAG---LRVPGHLRTKAIVGSAM-VPRGEVGLVFAEMG 359

Query: 347 RDLGILPEKFFVSVVVIALLTSTVAPIYVKSLVSKN 382
             +GI+  K F  +V+I  +T+   P+ +K  ++K+
Sbjct: 360 LQMGIISPKLFTELVLIIAITTIAGPLLLKWTLAKD 395