Pairwise Alignments

Query, 232 a.a., endonuclease III from Methanococcus maripaludis S2

Subject, 212 a.a., Endonuclease III (EC 4.2.99.18) from Pseudomonas fluorescens FW300-N2E2

 Score = 54.7 bits (130), Expect = 1e-12
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 44  HPNNYEYPKTK---NQCFEVCIGAILTQNTSWPSVEKSLKNLRKLIEITPENIINLDIEQ 100
           H +N E PKT+   +  FE+ I  IL+  ++   V K+   L  +   TPE I  L +E 
Sbjct: 14  HEDNPE-PKTELAYSSPFELLIAVILSAQSTDVGVNKATAKLFPVAN-TPEAIYALGVEG 71

Query: 101 LKEAIKPSGYYNQKSVRLKGFSEFFIKLN--HVP-TREELLKLNGVGPETADSMLLYAFK 157
           L E IK  G +N K+  +       I+ +   VP TRE L  L GVG +TA+ +L  AF+
Sbjct: 72  LSEYIKTIGLFNSKAKNVIETCRLLIERHGSEVPQTREALEALPGVGRKTANVVLNTAFR 131

Query: 158 VPSFVVDAYTKRILINLNLIDGSEKYDKIKELFE 191
             +  VD +  R+     L  G    +  K+L +
Sbjct: 132 QLTMAVDTHIFRVSNRTGLAPGKNVVEVEKKLMK 165