Pairwise Alignments

Query, 232 a.a., endonuclease III from Methanococcus maripaludis S2

Subject, 213 a.a., endonuclease III (RefSeq) from Shewanella loihica PV-4

 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 7/144 (4%)

Query: 33  NPTKTGSINGYHPNNYEYPKTK---NQCFEVCIGAILTQNTSWPSVEKSLKNLRKLIEIT 89
           N  K   I     +N   P+T+   +  FE+ +   L+   +  SV K+   L  +   T
Sbjct: 2   NTEKRRKILEIFRDNNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVAN-T 60

Query: 90  PENIINLDIEQLKEAIKPSGYYNQKSVRLKGFSEFFIKLN--HVP-TREELLKLNGVGPE 146
            + I +L +E LK+ IK  G YN K++ +    E  ++ +   VP  RE L  L GVG +
Sbjct: 61  AQAIYDLGVEGLKDYIKTIGLYNNKAINVIKACEILLEKHGGEVPEDREALEALPGVGRK 120

Query: 147 TADSMLLYAFKVPSFVVDAYTKRI 170
           TA+ +L  AF  P+  VD +  R+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRV 144