Pairwise Alignments

Query, 232 a.a., endonuclease III from Methanococcus maripaludis S2

Subject, 356 a.a., DUF123 domain-containing protein from Methanococcus maripaludis JJ

 Score = 63.2 bits (152), Expect = 7e-15
 Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 22/171 (12%)

Query: 56  QCFEVCIGAILTQNTSWPSVEKSLKNLRKLIEITPENIINLDIEQLKEAIKPSGYYNQKS 115
           + F++ I  +++  T   +  K  K L K ++  P++++ + I++L+  + P+G+Y  K+
Sbjct: 37  RAFKILISTVISARTKDETTAKVSKELFKKVK-NPKDLVKISIDELETLVHPAGFYKTKA 95

Query: 116 VRLKGFSEFFIKL--NHVPTR-EELLKLNGVGPETADSMLLYAFKVPSFVVDAYTKRILI 172
             LK   E  I+   ++VP   EEL+ L GVG +TA+ ++  AF   +  VD +  RI  
Sbjct: 96  KNLKKLGEILIEKYNSNVPNSIEELVTLPGVGRKTANLVMTLAFDDYAICVDTHVHRITN 155

Query: 173 NLNLIDGSEKYDKIKELFEENVEKNLEIYQEYHALIVEHAKNYYRKKENYI 223
             N +D             EN E  L           +  KNY++K  N +
Sbjct: 156 RWNYVDTES---------PENTEMELR---------KKLPKNYWKKINNLL 188