Pairwise Alignments

Query, 886 a.a., valine--tRNA ligase from Methanococcus maripaludis S2

Subject, 948 a.a., Valyl-tRNA synthetase (EC 6.1.1.9) from Pseudomonas fluorescens FW300-N2E2

 Score =  323 bits (827), Expect = 4e-92
 Identities = 274/957 (28%), Positives = 432/957 (45%), Gaps = 132/957 (13%)

Query: 11  LEKKVQEKWEDEKTFKFLDDEKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMN 70
           +E      WE E  F          Y I  PPP  TG +H+GHG N   MD + RF+RM 
Sbjct: 10  IETSWYNTWESENYFA--PQGAGDSYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQ 67

Query: 71  GYDVLFPQGWDCHGLPTEVKVE---ELNNITKSDIDRHEFRRLCVELTDENVEKMRGQVR 127
           G + L+  G D  G+ T++ VE   E     + D+ R +F     E  DE+   +  Q+R
Sbjct: 68  GRNTLWQPGTDHAGIATQMLVERRLEAQGQNRHDLGREKFLEKVWEWKDESGGNISRQIR 127

Query: 128 SLGISIDWDREYITMNPDYVRKSQTAFLKMYEKGLIYRGKHPVNWCPRCETAIAFAEVEY 187
            LG S+DW RE  TM+       + AF++++E GLIYRGK  VNW  +  TAI+  EVE 
Sbjct: 128 RLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVEN 187

Query: 188 QGRTSKLNYIKFPYAENS----GK-YLEIATSRPELMAACVGIVVHPEDERYSDVVGKTV 242
                 L  +K+P A+ +    GK YL +AT+RPE M     + V+P DERY  ++GK V
Sbjct: 188 HDEKGFLWNLKYPLADGAKTAEGKDYLIVATTRPETMLGDSAVAVNPNDERYQALIGKFV 247

Query: 243 KVPLFDQEVNVYPDSDVEKEFGTGVVMVCTFGDKTDVTWVNRHKLEV------------- 289
           ++PL  + + +  D   + EFGTG V +    D  D     RH L +             
Sbjct: 248 ELPLVGRRIPIIGDDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNIFDKNANVLPA 307

Query: 290 KKAINEKGQLTE-----ICGKYAGKKSDDARKEIISDLISENYMIKQEPLEQNVGSCWRC 344
            +  N  G L E     I  +YAG    +ARK+I++   +   ++  +     V    R 
Sbjct: 308 AQVFNLDGTLNESIDGQIPAEYAGLDRFEARKQIVAAFDAAGLLVSVDDHALKVPKGDRS 367

Query: 345 KTPIEIIVGDQWFVNVTKLLTEVENAANE---ISWVPEHMKARLMKWIEDMGWDWCISRQ 401
            T IE  + DQW+V+ TK L E   AA E   I +VP+  +     W+ D+  DWCISRQ
Sbjct: 368 GTIIEPWLTDQWYVS-TKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRDI-QDWCISRQ 425

Query: 402 RLFATPIPVWYCKDCGEIIVAKPEDLPIDPTKESPYTCKCGNSNLVAETDVLDTWMDSSI 461
             +   IP WY  + G++ V + E          P      +  L  + DVLDTW  S +
Sbjct: 426 LWWGHRIPAWY-DESGKVYVGRDEAEVRAKHNLGP------DVALAQDNDVLDTWFSSGL 478

Query: 462 TPLVIAGWLEDEEFFKKHYPVQLRPQGHDIIRTWAFYTMVRSLAI------TGEKPWDEI 515
                 GW +  EF KK +   +   G DII  W    ++ ++ +      T + P+  +
Sbjct: 479 WTFSTLGWPQQTEFLKKFHSTDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTV 538

Query: 516 VINGMVFGEDGFKMSKSRGNVVEPGEI--------------------------------- 542
            ++G+V    G KMSKS+GNV++P +I                                 
Sbjct: 539 YVHGLVRDGQGQKMSKSKGNVLDPLDIIDGIDLETLVQKRTSGLMQPKLAKKIEKATREE 598

Query: 543 ----TKTYGADALRL-WASNSTIGKDVPFAWKEVEYGGRFLRKIWNACKFAKMNISDETI 597
                 +YG DALR  + S ++ G+D+ F    VE    F  KIWNA ++    + D+  
Sbjct: 599 FAEGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKIWNAARY----VLDK-- 652

Query: 598 SELKSLNSISIE-NPVDLWILSKLNNLISKVSDDLGNYKINTVVE-IQKFLWHEFCDNYI 655
            E    N  + E    D WI+S+L    ++V+  L  ++ +   + + +F+W+++CD Y+
Sbjct: 653 GEDCGQNGEAFELTLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYL 712

Query: 656 EMVKHRLYNKEESESAQQEKLMAQYTLYKVITESVKLLTPFTPHFAEIVGEIYEIDDLHT 715
           E+ K  L+++      Q+     + TL +V+  +++L  PF P   E + +   I  L  
Sbjct: 713 ELSKPVLWDENAPVERQRG---TRRTLVRVLEVALRLAHPFMPFITEEIWQ--RIAPLAG 767

Query: 716 S---------WPVSDERLISLENEFVGEVVKNTVASIRRYKS----NKGMPL-----NAE 757
           +         WPV++E  I    E   E +K  +  +R  ++      G PL     NA 
Sbjct: 768 AQGKTIMLQPWPVANESRIDPAAEDDIEWLKTFMLGLRNIRAEMNIGPGKPLTLFLKNAS 827

Query: 758 LNKVEMYVSDEKDFNAVSK--------ASEDVKKSLK--IKELEINLGKPSLEQKISEVT 807
              +     +E     ++K        A E+   S    + E+E+ +    L  K +E+ 
Sbjct: 828 AEDLRRLNENEALLKKLAKLESVTVLAAGEEAPLSATALVGEMEVLVPMAGLIDKAAELA 887

Query: 808 PNKSKI---GPEFKKDAGKV--MAFIKEADADTIEKMLSEGIETE--FGILNKEHIK 857
               +I     E ++  GK+    F+ +A A+ IEK  ++  E E   G L ++H +
Sbjct: 888 RLDKEILRLKGEVQRVGGKLSNAGFVDKAPAEVIEKERAKLAEAEQALGKLAEQHAR 944