Pairwise Alignments

Query, 886 a.a., valine--tRNA ligase from Methanococcus maripaludis S2

Subject, 953 a.a., valyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score =  328 bits (841), Expect = 1e-93
 Identities = 249/936 (26%), Positives = 424/936 (45%), Gaps = 127/936 (13%)

Query: 11  LEKKVQEKWEDEKTFKFLDDEKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMN 70
           +E+ +   WE++  FK   D  +  Y I  PPP  TG +H+GH    T MD + R++RM 
Sbjct: 10  IEQALYRVWEEKGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLIRYQRMK 69

Query: 71  GYDVLFPQGWDCHGLPTEV----KVEELNNITKSDIDRHEFRRLCVELTDENVEKMRGQV 126
           G + L+  G D  G+ T++    K+E     ++ D+ R  F     E   ++   +  Q+
Sbjct: 70  GKNTLWQVGTDHAGIATQMLVERKLEAEQGKSRHDLGRDAFMEKVWEWKAQSGGTITSQL 129

Query: 127 RSLGISIDWDREYITMNPDYVRKSQTAFLKMYEKGLIYRGKHPVNWCPRCETAIAFAEVE 186
           R +G S+DWDRE  TM+       Q  F+++Y+  LIYRGK  VNW P+  TAI+  EVE
Sbjct: 130 RRMGASVDWDRERFTMDEGLSNAVQEVFVRLYDDKLIYRGKRLVNWDPKLHTAISDLEVE 189

Query: 187 YQGRTSKLNYIKFPYAENS----GK-YLEIATSRPELMAACVGIVVHPEDERYSDVVGKT 241
            + +   + + ++P A       GK YL +AT+RPE M     + VHPEDERY+ ++GK 
Sbjct: 190 NKEKAGHMWHFRYPLAGTELTADGKDYLVVATTRPETMLGDSAVAVHPEDERYASLIGKE 249

Query: 242 VKVPLFDQEVNVYPDSDVEKEFGTGVVMVCTFGDKTDVTWVNRHKLEVKKAINEKGQLTE 301
           + +P+ ++ + +  D  V+K+FGTG V +    D  D     RH L +   + +   +  
Sbjct: 250 IILPIVNRRIPIIADEYVDKDFGTGCVKITPAHDFNDYEVGKRHSLPMFNILTQDATIRA 309

Query: 302 ICG------------------KYAGKKSDDARKEIISDLISENYMIKQEPLEQNVGSCWR 343
           +                    +YAG     AR  I+++  +   + K EP    V    R
Sbjct: 310 LAEVLNTDGSHNSELDASLPERYAGLDRFKARDAIVAEFETLGLLEKIEPHALKVPYGDR 369

Query: 344 CKTPIEIIVGDQWFVNVTKL----LTEVENAANEISWVPEHMKARLMKWIEDMGWDWCIS 399
               IE ++ DQW+V V KL    +  VEN   +I +VP+  +     W+ D+  DWCIS
Sbjct: 370 SGVVIEPLLTDQWYVAVQKLAQPAIEAVENG--DIKFVPQQYENMYFSWMRDIQ-DWCIS 426

Query: 400 RQRLFATPIPVWYCKDCGEIIVAKPEDLPIDPTKESPYTCKCGNS-NLVAETDVLDTWMD 458
           RQ  +   IP WY  + G++ V + ED       E       G+   L  + DVLDTW  
Sbjct: 427 RQLWWGHRIPAWY-DEAGKVYVGRSED-------EVRQNHNLGSDVKLRQDDDVLDTWFS 478

Query: 459 SSITPLVIAGWLEDEEFFKKHYPVQLRPQGHDIIRTWAFYTMVRSLAITGEK------PW 512
           S++      GW E     K  +P  +   G DII  W    ++ ++    ++      P+
Sbjct: 479 SALWTFSTLGWPEQTPELKTFHPTDVLVTGFDIIFFWVARMIMMTMYFIKDEDGKPQVPF 538

Query: 513 DEIVINGMVFGEDGFKMSKSRGNVVEP--------------------------GEITKT- 545
             + + G++  E G KMSKS+GNV++P                           +I K+ 
Sbjct: 539 KTVYVTGLIRDEAGNKMSKSKGNVLDPLDMIDGIDLESLVQKRTGNMMQPQLAAKIEKST 598

Query: 546 ----------YGADALRLW-ASNSTIGKDVPFAWKEVEYGGRFLRKIWNACKFAKMNISD 594
                     +G DALR   A+ ++ G+D+ +  K ++    F  K+WNA ++  MN  +
Sbjct: 599 RKEFENGIEPHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKLWNASRYVLMNTEE 658

Query: 595 ETISELKSLNSISIENPVDLWILSKLNNLISKVSDDLGNYKINTVVE-IQKFLWHEFCDN 653
           +   +      +S+    D W++ K    +    + +  Y+ +     + +F W++FCD 
Sbjct: 659 QDCGQGGGDMKLSL---ADRWVIGKFQETVKAFDEHINAYRFDLAANTLYEFTWNQFCDW 715

Query: 654 YIEMVKHRLYNKEESESAQQEKLMAQYTLYKVITESVKLLTPFTPHFAEIVGEI------ 707
           Y+E+ K  L N  E+E         ++TL  V+ + ++L+ P  P+  E + +       
Sbjct: 716 YLELTKPVLQNGSEAEQRG-----TRHTLVTVLEQLLRLMHPMMPYITETIWDRVKPLAG 770

Query: 708 YEIDDLH-TSWPVSDERLISLENEFVGEVVKNTVASIRRYKSNKGMPLNAELNKVEMYVS 766
            E D L   S+P  D   +  +     E VK  + ++R  ++   +  +  L+ +   VS
Sbjct: 771 VEGDTLMLMSFPEFDAAKVDAKAMADLEWVKQVIVAVRNIRAELNIAPSKPLSALLRGVS 830

Query: 767 DEKD---------FNAVSK----------ASEDVKKSLKIKELEINL---GKPSLEQKIS 804
           DE           F  ++K           +  +  +  I E+E+ +   G   +  +++
Sbjct: 831 DEDKARIEANQAFFGTLAKLESMTILAEGEAAPMATTQLIGEMELLIPMAGLIDVAAEMA 890

Query: 805 EVTPNKSKIGPEFKKDAGKV--MAFIKEADADTIEK 838
            +     K+  E  +  GK+    F+ +A A+ IEK
Sbjct: 891 RIDKQLEKLTGEVARIEGKLSNQGFVAKAPAEVIEK 926