Pairwise Alignments

Query, 886 a.a., valine--tRNA ligase from Methanococcus maripaludis S2

Subject, 959 a.a., valyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  325 bits (833), Expect = 8e-93
 Identities = 236/842 (28%), Positives = 384/842 (45%), Gaps = 107/842 (12%)

Query: 11  LEKKVQEKWEDEKTFKFLDDEKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMN 70
           +E+ + + WE++  FK   DE    Y I  PPP  TG +H+GH    T MD + R++RM 
Sbjct: 10  IEQALYQNWEEKGYFKPHGDESNGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLIRYQRMK 69

Query: 71  GYDVLFPQGWDCHGLPTEV----KVEELNNITKSDIDRHEFRRLCVELTDENVEKMRGQV 126
           G + L+  G D  G+ T++    KVE     ++ D+ R  F     +  +++   +  Q+
Sbjct: 70  GKNTLWQVGTDHAGIATQMLVERKVEAEEGKSRHDLGRETFIDRIWDWKNQSGGTITKQL 129

Query: 127 RSLGISIDWDREYITMNPDYVRKSQTAFLKMYEKGLIYRGKHPVNWCPRCETAIAFAEVE 186
           R LG S+DWDRE  TM+       Q  F+++Y   LIYRGK  VNW P+  TAI+  EVE
Sbjct: 130 RRLGASVDWDRERFTMDEGMSAAVQEVFVRLYNDDLIYRGKRLVNWDPKLHTAISDLEVE 189

Query: 187 YQGRTSKLNYIKFPYAENS----GK-YLEIATSRPELMAACVGIVVHPEDERYSDVVGKT 241
            + +   + + ++P A+ +    GK YLE+AT+RPE M     + VHP+DERY  ++GK 
Sbjct: 190 NKEKQGSMWHFRYPLADGALTADGKDYLEVATTRPETMLGDSAVAVHPDDERYQSLIGKF 249

Query: 242 VKVPLFDQEVNVYPDSDVEKEFGTGVVMVCTFGDKTDVTWVNRHKLE------VKKAINE 295
           + +P+ ++ + +  D  V+ EFGTG V +    D  D     RH L       +  AI  
Sbjct: 250 ILLPIVNRRIPIVADDYVDMEFGTGCVKITPAHDFNDYEVGKRHNLPMFNILTIDAAIRS 309

Query: 296 KGQLTEICG------------KYAGKKSDDARKEIISDLISENYMIKQEPLEQNVGSCWR 343
           + ++    G            ++AG     AR  I+ +  S   + K +P    V    R
Sbjct: 310 QAEVVNSDGTANDELDGSLPERFAGLDRFKARTAIVDEFESLGLLGKIDPHALKVPYGDR 369

Query: 344 CKTPIEIIVGDQWFVNVTKLL-TEVENAAN-EISWVPEHMKARLMKWIEDMGWDWCISRQ 401
               IE ++ DQW+V V  +  T +E   N +I +VP+  +     W+ D+  DWCISRQ
Sbjct: 370 SGVVIEPLLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRDIQ-DWCISRQ 428

Query: 402 RLFATPIPVWYCKDCGEIIVAKPEDLPIDPTKESPYTCKCGNSNLVA---ETDVLDTWMD 458
             +   IP WY  + G++ V + E         +    K    + V    + DVLDTW  
Sbjct: 429 LWWGHRIPAWY-DEAGKVYVGRDE---------AEVRAKHNLDDSVVLRQDPDVLDTWFS 478

Query: 459 SSITPLVIAGWLEDEEFFKKHYPVQLRPQGHDIIRTWAFYTMVRSLAITGEK------PW 512
           S++      GW +D E  K  +P  +   G DII  W    ++ ++    ++      P+
Sbjct: 479 SALWTFSTLGWPDDTEALKTFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPF 538

Query: 513 DEIVINGMVFGEDGFKMSKSRGNVVEPGEIT----------------------------- 543
             + + G++  E G KMSKS+GNV++P ++                              
Sbjct: 539 KTVYVTGLIRDEQGNKMSKSKGNVLDPLDMIDGIDLEALVEKRTGNMMQPQLAAKIEKST 598

Query: 544 --------KTYGADALRLW-ASNSTIGKDVPFAWKEVEYGGRFLRKIWNACKFAKMNISD 594
                   + +G DALR   A+ ++ G+D+ +  K ++    F  KIWNA ++  MN  +
Sbjct: 599 RKEFADGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKIWNASRYVLMNTEE 658

Query: 595 ETISELKSLNSISIENPVDL---WILSKLNNLISKVSDDLGNYKINTVVE-IQKFLWHEF 650
           +             E  + L   WI+   N  +    + + NY+ +     + +F W++F
Sbjct: 659 QDCGPQSPNGKADGEMQLSLADRWIVGLFNQTVKAFDEHMENYRFDLAANTLYEFTWNQF 718

Query: 651 CDNYIEMVKHRLYNKEESESAQQEKLMAQYTLYKVITESVKLLTPFTPHFAEIVGEI--- 707
           CD Y+E+ K  L N  E+E         ++TL  V+    +LL P  P+  E + +    
Sbjct: 719 CDWYLELTKPVLQNGTEAEQRG-----TRHTLVTVLEAMQRLLHPMMPYLTETIWQRVKP 773

Query: 708 ---YEIDDLH-TSWPVSDERLISLENEFVGEVVKNTVASIRRYKSNKGM----PLNAELN 759
               E D L    +PV     +        E VK  + ++R  ++   +    PLNA L 
Sbjct: 774 LAGVEGDTLMLAEFPVYQASKVDEAAMADLEWVKQVIVAVRNIRAELNIAPSKPLNAMLR 833

Query: 760 KV 761
            V
Sbjct: 834 SV 835