Pairwise Alignments

Query, 886 a.a., valine--tRNA ligase from Methanococcus maripaludis S2

Subject, 940 a.a., isoleucyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  248 bits (633), Expect = 1e-69
 Identities = 195/766 (25%), Positives = 330/766 (43%), Gaps = 80/766 (10%)

Query: 12  EKKVQEKWEDEKTFKFLDDEK--RPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRM 69
           E ++ E+W  +  ++ + D +  R P+I+   PPY  G +H+GH +N    DII + K M
Sbjct: 25  EPEMLERWTKDGLYQQIRDSRIGRTPFILHDGPPYANGSIHIGHSVNKILKDIIVKSKTM 84

Query: 70  NGYDVLFPQGWDCHGLPTEVKVEELNNITKSDIDRHEFRRLCVELTDENVEKMRGQVRSL 129
           +G+D  +  GWDCHGLP E+KVE+        I   EFR  C +   E V+  R     L
Sbjct: 85  SGFDAPYVPGWDCHGLPIELKVEQKVGKPGQKISAAEFREECRKYAAEQVDGQREDFIRL 144

Query: 130 GISIDWDREYITMNPDYVRKSQTAFLKMYEKGLIYRGKHPVNWCPRCETAIAFAEVEYQG 189
           G+  DW   Y+TM+         +  K+ E G +++G  PV+WC  C +A+A AEVEY+ 
Sbjct: 145 GVLGDWQNPYLTMDFATEANIVRSLSKVIENGHLHKGVKPVHWCTDCGSALAEAEVEYED 204

Query: 190 RT------------SKLNYIKFPYAENSGKY-LEIATSRPELMAACVGIVVHPEDE---- 232
           +T            SK   +KF  ++ S    + I T+ P  + A   + + PE +    
Sbjct: 205 KTSPAIDVAFTAVDSKAVAVKFGVSDYSHSVSMVIWTTTPWTLPANRALSISPELDYSLV 264

Query: 233 -----------------------RYS----DVVGK---------TVKVPLFDQEVNVYPD 256
                                  RY      V+ K           K P    +V     
Sbjct: 265 EFVKDGVTHAVILADVLVEACMTRYGAESHSVLAKIKGAALELVRFKHPFLAFDVPAILG 324

Query: 257 SDVEKEFGTGVVMVCTFGDKTDVTWVNRHKLEVKKAINEKGQLTEICGKYAGKKSDDARK 316
             V  + GTGVV       + D     ++ LEV   + + G        +AG+    A  
Sbjct: 325 DHVTTDAGTGVVHTAPGHGQDDFVVGQKYGLEVANPVGDNGVYKPDTEFFAGQHVFKAND 384

Query: 317 EIISDLISENYMIKQEPLEQNVGSCWRCKTPIEIIVGDQWFVNVT--KLLTEVENAANEI 374
            +++ L  +  ++       +   CWR KTPI      QWF+++    L  +  +   +I
Sbjct: 385 NVVALLKEKGALLHHVAYRHSYPHCWRHKTPIIFRATPQWFISMDNHNLRKQALSEIEQI 444

Query: 375 SWVPEHMKARLMKWIEDMGWDWCISRQRLFATPIPVWYCKDCGEI----------IVAKP 424
            W+P+  ++R+ K +E+   DWCISRQR +  PI ++  ++  E+          +  + 
Sbjct: 445 QWIPDWGQSRIEKMVENRP-DWCISRQRTWGVPITLFVHRETEELHPDSVSLMARVANRI 503

Query: 425 EDLPIDPTKESPYTCKCGN--SNLVAETDVLDTWMDSSITPLVIAGWLEDEEFFKKHYPV 482
           E   I    +       G         TD LD W DS  T    A  +     F  H  V
Sbjct: 504 EQEGIQAWWDLDAAELLGEEAEQYRKVTDTLDVWYDSGST---FASVVAARPEFHGH-GV 559

Query: 483 QLRPQGHDIIRTWAFYTMVRSLAITGEKPWDEIVINGMVFGEDGFKMSKSRGNVVEPGEI 542
            L  +G D  R W   +++ S A+TG+ P+ +++ +G      G KMSKS GNV+ P ++
Sbjct: 560 DLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQQV 619

Query: 543 TKTYGADALRLWASNSTIGKDVPFAWKEVEYGGRFLRKIWNACKFAKMNISDETISELKS 602
           T   GAD LRLW + +    ++  + + +       R+I N  +F   N++         
Sbjct: 620 TNKLGADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTARFLLANLNG--FDPKND 677

Query: 603 LNSISIENPVDLWILSKLNNLISKVSDDLGNYKINTVVE-IQKFLWHEFCDNYIEMVKHR 661
           L ++     +D W + +   L  ++ +    Y  + V + + +F   E    Y++++K R
Sbjct: 678 LVAVEDMVALDRWAVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCSIELGSFYLDIIKDR 737

Query: 662 LYNKEESESAQQEKLMAQYTLYKVITESVKLLTPFTPHFAEIVGEI 707
            Y  ++   A++     Q  L+ +    V+ + P     A+ V ++
Sbjct: 738 QYTAKQEGHARRS---CQSALFHIAEAMVRWIAPVLSFTADEVWQL 780