Pairwise Alignments

Query, 886 a.a., valine--tRNA ligase from Methanococcus maripaludis S2

Subject, 958 a.a., valyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  313 bits (801), Expect = 4e-89
 Identities = 229/845 (27%), Positives = 387/845 (45%), Gaps = 114/845 (13%)

Query: 11  LEKKVQEKWEDEKTFKFLDDEKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMN 70
           +E+ + + WE++  FK   D  +  Y I  PPP  TG +H+GH    T MD + R++RM 
Sbjct: 10  IEQTLYQNWEEKGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLIRYQRMK 69

Query: 71  GYDVLFPQGWDCHGLPTEV----KVEELNNITKSDIDRHEFRRLCVELTDENVEKMRGQV 126
           G + L+  G D  G+ T++    K+E     ++ D+ R  F     E   ++   +  Q+
Sbjct: 70  GKNTLWQVGTDHAGIATQMLVERKLEAEEGKSRHDLGRDVFMEKVWEWKAQSGGTITKQL 129

Query: 127 RSLGISIDWDREYITMNPDYVRKSQTAFLKMYEKGLIYRGKHPVNWCPRCETAIAFAEVE 186
           R +G S+DWDRE  TM+    +  Q  F+++YE  LIYRGK  VNW P+  TAI+  EVE
Sbjct: 130 RRMGASVDWDRERFTMDEGLSKAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVE 189

Query: 187 YQGRTSKLNYIKFPYAENS----GK-YLEIATSRPELMAACVGIVVHPEDERYSDVVGKT 241
            + +   + ++++P A+      GK YLE+AT+RPE M     + VHP+DERY  ++GK 
Sbjct: 190 NKEKQGHMWHLRYPLADGELTADGKDYLEVATTRPETMLGDSAVAVHPDDERYQALIGKY 249

Query: 242 VKVPLFDQEVNVYPDSDVEKEFGTGVVMVCTFGDKTDVTWVNRHKLEV------------ 289
           + +P+ ++ + +  D  V+  FGTG V +    D  D     RHKL +            
Sbjct: 250 ILLPIVNRRIPIVADDYVDMAFGTGCVKITPAHDFNDYEVGKRHKLPMFNVLTLDAAIRS 309

Query: 290 -KKAINEKGQL-TEICG----KYAGKKSDDARKEIISDLISENYMIKQEPLEQNVGSCWR 343
             + +N  G + T + G    +YAG     AR  I+++  +   + K  P    V    R
Sbjct: 310 SAEVVNTDGTINTSLDGSLPERYAGLDRFKARDAIVAEFETLGLLEKIAPHGLKVPYGDR 369

Query: 344 CKTPIEIIVGDQWFVNVTKLL-TEVENAAN-EISWVPEHMKARLMKWIEDMGWDWCISRQ 401
               IE ++ DQW+V V  +  T +E   N +I +VP+  +     W+ D+  DWCISRQ
Sbjct: 370 SGVVIEPMLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRDIQ-DWCISRQ 428

Query: 402 RLFATPIPVWYCKDCGEIIVAKPEDLPIDPTKESPYTCKCGNSNLVA---ETDVLDTWMD 458
             +   IP WY  + G++ V + E         +    K    + +A   + DVLDTW  
Sbjct: 429 LWWGHRIPAWYDTN-GKVYVGRTE---------AEVRAKHDIDDAIALRQDEDVLDTWFS 478

Query: 459 SSITPLVIAGWLEDEEFFKKHYPVQLRPQGHDIIRTWAFYTMVRSLAITGEK------PW 512
           S++      GW ++ E  K  +P  +   G DII  W    ++ ++    ++      P+
Sbjct: 479 SALWTFSTLGWPDNVEDLKTFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPF 538

Query: 513 DEIVINGMVFGEDGFKMSKSRGNVVEPGEIT----------------------------- 543
             + + G++  E G KMSKS+GNV++P ++                              
Sbjct: 539 KTVYVTGLIRDEAGNKMSKSKGNVLDPLDMIDGIDLETLVEKRTGNMMQPQLAAKIEKST 598

Query: 544 --------KTYGADALRLW-ASNSTIGKDVPFAWKEVEYGGRFLRKIWNACKFAKMNISD 594
                   + +G DALR   A+ ++ G+D+ +  K ++    F  K+WNA ++  MN   
Sbjct: 599 RKEFENGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKLWNASRYVLMNTEG 658

Query: 595 ETISELKSLNSISIENP------VDLWILSKLNNLISKVSDDLGNYKINTVVE-IQKFLW 647
           +        NS   +         D WI+   N  +    + + +Y+ +     + +F W
Sbjct: 659 QDCGP----NSPDYQGGEMELSLADRWIIDLFNQTVKTYDEHMASYRFDLAANTLYEFTW 714

Query: 648 HEFCDNYIEMVKHRLYNKEESESAQQEKLMAQYTLYKVITESVKLLTPFTPHFAEIVGE- 706
           ++FCD Y+E+ K  L N  E++         ++TL  V+    +L+ P  P+  E + + 
Sbjct: 715 NQFCDWYLELTKPVLQNGTEAQMRG-----TRHTLVNVLEAMQRLMHPMMPYITETIWQR 769

Query: 707 ------IYEIDDLHTSWPVSDERLISLENEFVGEVVKNTVASIRRYKSNKGM----PLNA 756
                 +     +   +P  D   +        E VK  + ++R  ++   +    PLNA
Sbjct: 770 VKPLTGVQGDTIMLAPFPAFDAAKVDATAMADLEWVKQVIVAVRNIRAELNIAPSKPLNA 829

Query: 757 ELNKV 761
            L  V
Sbjct: 830 LLRGV 834