Pairwise Alignments

Query, 238 a.a., AzlC family ABC transporter permease from Methanococcus maripaludis S2

Subject, 236 a.a., putataive branched-chain amino acid transport protein AzlC from Pseudomonas fluorescens FW300-N2E2

 Score = 79.3 bits (194), Expect = 6e-20
 Identities = 57/228 (25%), Positives = 111/228 (48%), Gaps = 11/228 (4%)

Query: 4   LSFNKLYFEGIKDAIPISIGYLPIGMAFGVLAKSMGIPYEISILMSLIIFAGASQFVGVN 63
           L+ N +Y +G K  IPIS+  +  G+AFG+ A   G+    ++LMS ++FAGASQF  ++
Sbjct: 11  LTLNHIY-DGFKQLIPISLFVVVFGVAFGLAAAQTGLSDTSAVLMSTLVFAGASQFAALD 69

Query: 64  LIAIGTSSFEIVLTTFILNLRHFLMSSSLSQRI-DYTKSKKFLSLISFGVTDETFAVASL 122
           L         +++T F +N RH LM ++L   + +   +K++  ++     +   A+ +L
Sbjct: 70  LWGQQVPVVPLMITVFAINARHLLMGATLYPWLRELPVAKRYGVMLVVSDANWAMAMQAL 129

Query: 123 KEELKLSPEFLFGLNFTAFFAWNFGTVLGIFLAESIPKEIQSSMGISLYV-MFIGLLIPA 181
               K     LFG     + AW  G+ LG+    +I   +  S G+ + +  F+  ++  
Sbjct: 130 SRG-KPGLGLLFGGGIALWVAWILGSWLGLHFGSAIENPV--SFGLDMVMGCFLLAMVVG 186

Query: 182 VRRSTKVLKIFLVAVFISSALTWVPVFKFISTGWIIIITTIVASFIGA 229
            +++ ++  I+ VA   S    W     ++     +++  +    +GA
Sbjct: 187 GKKNLRMFIIWTVAACSSLLAYW-----YLPANSHVVVGALAGGILGA 229