Pairwise Alignments

Query, 238 a.a., AzlC family ABC transporter permease from Methanococcus maripaludis S2

Subject, 245 a.a., AzlC family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  123 bits (308), Expect = 4e-33
 Identities = 82/219 (37%), Positives = 124/219 (56%), Gaps = 14/219 (6%)

Query: 12  EGIKDAIPISIGYLPIGMAFGVLAKSMGIPYEISILMSLIIFAGASQFVGVNLIAIGTSS 71
           EG++ A PI +GY+P+G AFGVLA   GIP   ++ MSL +FAG+ Q + V LI  G   
Sbjct: 6   EGVRRAFPIVLGYVPVGFAFGVLALKSGIPAWGALAMSLFVFAGSGQLIAVGLIGGGAPL 65

Query: 72  FEIVLTTFILNLRHFLMSSSLSQRI-DYTKSKKFLSLISFGVTDETFA--VASLKEEL-K 127
             +VLTTF++NLRH LMS++L+ R+ D+   ++  +L S  +TDETFA  V++L+ E   
Sbjct: 66  ASVVLTTFVVNLRHLLMSAALAPRLRDWGLLRQ--ALFSAEMTDETFAVHVSTLRGEADD 123

Query: 128 LSPEFLFGLNFTAFFAWNFGTVLGIFLAESIPKEIQSSMGISLYVMFIGLLIPAVRRSTK 187
            S   +F  N TA  AW  G+ LG+F +  +       +  +L  MFI LL+P  R    
Sbjct: 124 PSRAAVFACNVTAHAAWVGGSALGVFCSTLVADVRPLGLDYALAAMFIALLLPQCRS--- 180

Query: 188 VLKIFLVAVFISSALTWVPVFKFISTG-WIIIITTIVAS 225
             +  L A  ++ A +    F     G W +++ T+ A+
Sbjct: 181 --RAHLFAALVAGACS--VGFALSGAGRWNVMLATVCAA 215