Pairwise Alignments

Query, 238 a.a., DUF115 domain-containing protein from Methanococcus maripaludis S2

Subject, 441 a.a., conserved domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 64/239 (26%)

Query: 33  EMIKKFKNNV-------DLNEISKKIFGKKVYIFGAGPSLKKHVLKLKE--SIESNITII 83
           E++K+F +N        D   ++K     K  + G+GPSL++H   LK+     S   +I
Sbjct: 179 EILKRFADNQVFITNDPDAAHLTKSYNPYKAIVIGSGPSLEEHYAYLKQLSLSPSRPLLI 238

Query: 84  AADGATKALLEEDIVPDIIVSDLDGDIDS----ILKSNDLGSI--------VVAH----- 126
           AAD A + LL   I PDI+V  +DG I S    + ++ ++  +        V+AH     
Sbjct: 239 AADTALRGLLHHQIKPDIVVC-IDGLISSYHLPLSETQEINLVYFPRVAPEVLAHWLGPR 297

Query: 127 --AHG-----DNIDKLEKYIKLLKNIVGSTQFPKKFEFLINYGGFTDGDRCCFLAEEFGA 179
             A+G     D++ +L   ++L  N  GS   P                    LA +  A
Sbjct: 298 FVAYGTSKIYDSMSQLNPKLRLFTN--GSVIHP-----------------AIDLAVKLHA 338

Query: 180 KKIILCGMDF-------GIYVTKYSRPNIEKDIELADEIKVKKLKYAEMFVNWLITNGK 231
           K+I L G DF         +   Y   + +K  ++  E  ++K++ A+   +WLI NGK
Sbjct: 339 KEITLLGCDFCYCNNKSHAFWNDYPFESKDKFEKIWVEAVIQKVREAK---HWLI-NGK 393