Pairwise Alignments

Query, 200 a.a., class I SAM-dependent methyltransferase from Methanococcus maripaludis S2

Subject, 376 a.a., 23S rRNA (guanine(1835)-N(2))-methyltransferase from Klebsiella michiganensis M5al

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 14/199 (7%)

Query: 8   PDSKHDESTISGMLRGKRFSFKTDSGVFSPKKIDKGTIILVEELELSKDDDVLDVGCGYG 67
           P+      T S  L G  ++    + VF+   +D G    +E L  + + ++ D+GCG G
Sbjct: 179 PEVADAPQTYSWQLDGTPWTIHNHANVFARSGLDIGARFFLEHLPANIEGEIADLGCGNG 238

Query: 68  VIGIS--IADEVNSVTMTDLNNRSVGLTRKNIKLNGKSE-KNIEVFQGDLFEKVNNKKYS 124
           VIG+     +    V  TD +  +V  +R N++ N   + +  E    +    +   +++
Sbjct: 239 VIGLKALALNPDARVMFTDESYMAVASSRLNVETNLPDDIERCEFVVNNALSDIEPDRFA 298

Query: 125 VIISNPPIKAGKELIHKI----ISKGHNLLNENGSIWVVIQTKHGAKSLTKY--MEEIFG 178
            I+ NPP      +   I     +     L   G ++VV     G + L  +  ++  FG
Sbjct: 299 AILCNPPFHQQHAITDHIAWQMFNDARRSLKYGGELYVV-----GNRHLDYFRKLKRAFG 353

Query: 179 NVETVTISGGYRVLKSVNM 197
           N  T+  +  + VLK+  +
Sbjct: 354 NCTTIATNNKFVVLKATKV 372