Pairwise Alignments

Query, 264 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 251 a.a., Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 99.0 bits (245), Expect = 9e-26
 Identities = 65/222 (29%), Positives = 118/222 (53%), Gaps = 9/222 (4%)

Query: 45  LKVGLCAAWPPFESRNEKTGEIEGFDVDLANALGEELGIEVEIVDAEWQALLGGLSKGDY 104
           LK+G+ AA+PPF ++ + +G++ GFD D+ +AL  ++ +E E+V + W  ++  L    +
Sbjct: 27  LKMGIEAAYPPFNNK-DASGQVVGFDKDIGDALCAKMKVECEVVTSNWDGIIPALMAKKF 85

Query: 105 DTLITCMSKKEASVENVEMSEVYYELN-DVIVVRNDNNEINNVSDLSGKIVGVQLGS-GS 162
           D LI+ +S  +   + V+ ++ YY      I  +N + +++  S L GK++G Q  +   
Sbjct: 86  DFLISSLSVNDERKQAVDFTDPYYSNKLQFIAPKNVDFKVDKES-LKGKVIGAQRSTLAG 144

Query: 163 EQAVDALSGIKEIKRYNYNPEAMIDLQNNRSDAVV----VGYTYVLSEISKYPDLKVLDT 218
               D L      K Y+    A +DL + R DA++    V Y ++ +E  +  + K  D 
Sbjct: 145 TWLEDELGSDITAKLYDTQENAYLDLTSGRVDAILADKYVNYDWLKTEAGRAYEFKG-DP 203

Query: 219 PIASAEIVMVQKEGAKELTVKLNEALSKIKENGKYDEIQDKW 260
            +   +I +  ++G  EL  KLN AL +I  +G Y +I DK+
Sbjct: 204 VVEGDKIAIAVRKGNDELRNKLNAALKEILADGTYKKINDKY 245