Pairwise Alignments

Query, 264 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 257 a.a., amino acid-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  102 bits (254), Expect = 8e-27
 Identities = 70/253 (27%), Positives = 126/253 (49%), Gaps = 12/253 (4%)

Query: 15  AVLAFSGCVSNSEAQSTEDNSWKNVEESGVLKVGLCAAWPPFESRNEKTGEIEGFDVDLA 74
           A+L F+  V     Q+ ++     V+ +GVLK+G    + PF + ++ +G + GFDV++ 
Sbjct: 11  ALLQFAAFVPAEAGQNLDE-----VKSAGVLKIGTEGTYAPF-TYHDASGALVGFDVEIG 64

Query: 75  NALGEELGIEVEIVDAEWQALLGGLSKGDYDTLITCMSKKEASVENVEMSEVYYELNDVI 134
             + + LG++ E ++ +W  L+ GL    YD +I  +   E   +  + SE Y     V+
Sbjct: 65  QEVAKRLGVKPEFLEGKWDGLIAGLDANRYDAVINQVGITEERKKKYDFSEPYIASKAVL 124

Query: 135 VVRNDNNEINNVSDLSGKIVGVQLGSGSEQAVDALSGIKEIKRYNYNPEAMIDLQNNRSD 194
           +VR D+ EI + +DL GK     L S   +   A SG + +    ++    + L   R+D
Sbjct: 125 IVRGDDEEIKDFADLKGKKSAQSLTSNFGKLAQA-SGAELVGTDGFDQSIQLVL-TGRAD 182

Query: 195 AVVVGYTYVLSEISKYPDLKV---LDTPIASAEIVMVQKEGAKELTVKLNEALSKIKENG 251
           A +      L    + PD  V    + P A    ++++K G  EL   +N+AL++IK +G
Sbjct: 183 ATINDSLSFLDFKKQKPDANVKIAAEKPDADYSGIIIRK-GEPELLEAINKALAEIKADG 241

Query: 252 KYDEIQDKWLSLE 264
            Y++I  K+   +
Sbjct: 242 TYEKISQKYFGAD 254