Pairwise Alignments

Query, 264 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 258 a.a., putative amino-acid ABC transporter, periplasmic solute-binding protein from Phaeobacter inhibens DSM 17395

 Score = 90.1 bits (222), Expect = 4e-23
 Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 6/227 (2%)

Query: 42  SGVLKVGLCAAWPPFESRNEKTGEIEGFDVDLANALGEELGIEVEIVDAEWQALLGGLSK 101
           S  L+VG+   + PF    +    ++GF+VD+ NA+ EE G+EVE V   +  L+G L  
Sbjct: 24  SDTLRVGMSGGYFPFTFVRQDV--LQGFEVDVMNAVAEETGLEVEFVTMSFSGLIGALES 81

Query: 102 GDYDTLITCMSKKEASVENVEMSEVY-YELNDVIVVRNDNNEINNVSDLSGKIVGVQLGS 160
              DT+   ++           ++ Y  +   V+V R + + I   +DL+GK V V LGS
Sbjct: 82  DRIDTIANQITITPERSAKFAFTQAYVIDGAQVVVKRGNEDSIAGPADLAGKTVAVNLGS 141

Query: 161 GSEQAVDALSGIKEIKRYNYNPEAMIDLQNNRSDAVVVGYTYVLSEISKYP-DLKVLDTP 219
             EQ +  L    +I+   Y      D    R DA V+        I + P  L +   P
Sbjct: 142 NFEQLLRELPQADKIEIKTYEANIAQDTALGRVDAFVMDRVSSAQLIQESPLPLALAGAP 201

Query: 220 IASAEIVMVQKEGAKELTV--KLNEALSKIKENGKYDEIQDKWLSLE 264
            +     +  ++GA  L +  +++ AL+ ++E GK  EI  KW   +
Sbjct: 202 FSEIRNALPFRQGADSLALRDRVDTALTTLREGGKLAEISQKWFGTD 248