Pairwise Alignments

Query, 616 a.a., molybdopterin biosynthesis protein from Methanococcus maripaludis S2

Subject, 301 a.a., DNA binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 68/279 (24%), Positives = 128/279 (45%), Gaps = 26/279 (9%)

Query: 330 YMSAKGREEYLPVSIIRGNDGYGAYPVLKGSEAITSLTYADGYIIIPENKEIVEDEIFDV 389
           YMSAK   EYL ++  +       Y +   ++ I   T   G  + P  K +++  + D 
Sbjct: 9   YMSAKQVAEYLDLNEKK------VYSM--ANDRILPATKVTGKWLFP--KILIDRWVMDS 58

Query: 390 HMFGDIRIGLNIIGSH----CVGIDRILRK--GHILARTVNTGSLGGIMAVKRKEADIAG 443
              G +   ++I GS      + + R++ K     L    +TGS  G+  + R  AD+  
Sbjct: 59  CHSGMLSDRMHITGSDDPLLSMLVARLMSKIGKSDLISYSSTGSRMGLDLLSRGYADVCT 118

Query: 444 IHLLDNNGEYNVSY---LKKY-NVSDAVLVRGYIREQGFMFKKELGIKSIDDLIEKI--R 497
           +H   N  E N+ +   LK Y N    V+V GY R+QG M + E+  +  ++  EK+  +
Sbjct: 119 LHW-GNVEERNIRHPALLKGYPNHQQWVMVHGYTRQQGLMMRSEMHHRCQEE--EKVIGQ 175

Query: 498 DYRIINRNKGSGTRILFDKFLKENNVDKNSIDGYDIEAKTHSAVGTAVSMGKAQIGLGIS 557
            +R + R  G+G++   + +L +       ++   I A +   +   ++  +A IG G  
Sbjct: 176 PWRWVGRQAGAGSQQHLEHWLIKQGASIEQLNP-QITAYSERELAGFIARNEADIGFGCQ 234

Query: 558 TISDHYGLEFIPIADEYYDLLIPKEKLYDEDIIKFIETL 596
           +++   GL F+P+  E +D ++P+   +   +    E L
Sbjct: 235 SVALESGLSFVPLVTESFDFVMPQGIYFRRQLQALFEML 273